ENCFF001RMM

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 406.00 0.03 0.67 100.0 GAS5-230 retained intron frontal cortex (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 4187.00 0.30 6.90 100.0 GAS5-230 retained intron frontal cortex (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 43620.00 3.10 71.89 100.0 GAS5-230 retained intron frontal cortex (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1118_+ 1048–1118 481.00 0.03 0.79 100.0 GAS5-230 retained intron frontal cortex (Tissue)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 2320.00 18.14 3.82 100.0 FTX-219 lncRNA frontal cortex (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 5044.00 39.43 8.31 82.96 FTX-219 lncRNA frontal cortex (Tissue)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 53.00 2.12 0.09 54.64 CTC1-214 protein coding frontal cortex (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 45.00 1.80 0.07 26.47 CTC1-214 protein coding frontal cortex (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 203.00 8.12 0.33 52.32 CTC1-214 protein coding frontal cortex (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 44.00 1.76 0.07 45.36 CTC1-214 protein coding frontal cortex (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 551.00 22.03 0.91 88.44 CTC1-214 protein coding frontal cortex (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 42.00 1.68 0.07 100.0 CTC1-214 protein coding frontal cortex (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 63.00 2.52 0.10 100.0 CTC1-214 protein coding frontal cortex (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 573.00 22.91 0.94 100.0 CTC1-214 protein coding frontal cortex (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 317.00 0.83 0.52 65.5 ENST00000651540 lncRNA frontal cortex (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 983.00 2.57 1.62 99.49 ENST00000651540 lncRNA frontal cortex (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 775.00 2.02 1.28 100.0 ENST00000651540 lncRNA frontal cortex (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 1995.00 5.21 3.29 61.88 ENST00000651540 lncRNA frontal cortex (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 288.00 0.75 0.47 100.0 ENST00000651540 lncRNA frontal cortex (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 290.00 0.76 0.48 100.0 ENST00000651540 lncRNA frontal cortex (Tissue)
ENST00000651540.1 ENST00000651540.1_6_79_+ 6–79 247.00 0.65 0.41 100.0 ENST00000651540 lncRNA frontal cortex (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 646.00 1.69 1.06 100.0 ENST00000651540 lncRNA frontal cortex (Tissue)
ENST00000651540.1 ENST00000651540.1_6_88_+ 6–88 319.00 0.83 0.53 100.0 ENST00000651540 lncRNA frontal cortex (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 6010.00 15.70 9.90 47.25 ENST00000651540 lncRNA frontal cortex (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 1953.00 5.10 3.22 100.0 ENST00000651540 lncRNA frontal cortex (Tissue)