ENCFF001RMM

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 3383.00 0.84 5.58 100.0 U2.6-201 snRNA frontal cortex (Tissue)
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 1603.00 2.00 2.64 69.3 ENST00000619323 lncRNA frontal cortex (Tissue)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 76138.00 95.00 125.48 98.3 ENST00000619323 lncRNA frontal cortex (Tissue)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 133.00 18.02 0.22 100.0 SCARNA4-202 scaRNA frontal cortex (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 6488.00 72.64 10.69 100.0 ENST00000625572 miRNA frontal cortex (Tissue)
ENST00000628177.1 ENST00000628177.1_1_79_+ 1–79 29572.00 95.86 48.73 100.0 ENST00000628177 snoRNA frontal cortex (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 6816.00 94.04 11.23 100.0 ENST00000630615 snoRNA frontal cortex (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 112.00 72.26 0.18 100.0 DMRT2-209 protein coding frontal cortex (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 6.00 3.87 0.01 100.0 DMRT2-209 protein coding frontal cortex (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 969.00 7.76 1.60 100.0 SNORD98-201 snoRNA frontal cortex (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 9483.00 75.92 15.63 100.0 SNORD98-201 snoRNA frontal cortex (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 211434.35 50.83 348.44 53.1 MIR106AHG-201 lncRNA frontal cortex (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 218.97 0.05 0.36 21.01 MIR106AHG-201 lncRNA frontal cortex (Tissue)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 81.00 0.02 0.13 100.0 MIR106AHG-201 lncRNA frontal cortex (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 759.98 0.18 1.25 72.93 MIR106AHG-201 lncRNA frontal cortex (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 6564.00 59.95 10.82 100.0 MEG8-222 lncRNA frontal cortex (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 1957.00 17.87 3.23 100.0 MEG8-222 lncRNA frontal cortex (Tissue)
ENST00000640631.2 ENST00000640631.2_7388_7482_+ 7388–7482 28404.00 4.66 46.81 92.27 SNHG14-224 lncRNA frontal cortex (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 272005.00 44.61 448.26 95.66 SNHG14-224 lncRNA frontal cortex (Tissue)
ENST00000640631.2 ENST00000640631.2_9465_9551_+ 9465–9551 58868.00 9.66 97.01 100.0 SNHG14-224 lncRNA frontal cortex (Tissue)
ENST00000640631.2 ENST00000640631.2_5267_5357_+ 5267–5357 44200.00 7.25 72.84 94.97 SNHG14-224 lncRNA frontal cortex (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 949.00 0.16 1.56 100.0 SNHG14-224 lncRNA frontal cortex (Tissue)
ENST00000640631.2 ENST00000640631.2_7389_7479_+ 7389–7479 10067.00 1.65 16.59 54.75 SNHG14-224 lncRNA frontal cortex (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 93820.00 15.39 154.62 79.47 SNHG14-224 lncRNA frontal cortex (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 43863.00 7.19 72.29 58.57 SNHG14-224 lncRNA frontal cortex (Tissue)