ENCFF001RMM

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 47521.00 39.87 78.31 82.51 NOP56-219 retained intron frontal cortex (Tissue)
ENST00000612463.1 ENST00000612463.1_1_83_+ 1–83 990.00 13.75 1.63 47.12 RNA5-8SN2-201 rRNA frontal cortex (Tissue)
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 40.22 0.56 0.07 61.88 RNA5-8SN2-201 rRNA frontal cortex (Tissue)
ENST00000612463.1 ENST00000612463.1_1_50_+ 1–50 4.00 0.06 0.01 100.0 RNA5-8SN2-201 rRNA frontal cortex (Tissue)
ENST00000612463.1 ENST00000612463.1_1_25_+ 1–25 507.00 7.04 0.84 100.0 RNA5-8SN2-201 rRNA frontal cortex (Tissue)
ENST00000612463.1 ENST00000612463.1_10_37_+ 10–37 105.00 1.46 0.17 100.0 RNA5-8SN2-201 rRNA frontal cortex (Tissue)
ENST00000612463.1 ENST00000612463.1_1_81_+ 1–81 1447.00 20.10 2.38 59.38 RNA5-8SN2-201 rRNA frontal cortex (Tissue)
ENST00000612463.1 ENST00000612463.1_83_123_+ 83–123 38.65 0.54 0.06 59.46 RNA5-8SN2-201 rRNA frontal cortex (Tissue)
ENST00000615835.1 ENST00000615835.1_56_79_+ 56–79 4.00 80.00 0.01 100.0 MIR7974-201 miRNA frontal cortex (Tissue)
ENST00000616574.2 ENST00000616574.2_44_64_+ 44–64 23.00 21.10 0.04 100.0 MIR376A1-201 miRNA frontal cortex (Tissue)
ENST00000616574.2 ENST00000616574.2_7_27_+ 7–27 40.00 36.70 0.07 100.0 MIR376A1-201 miRNA frontal cortex (Tissue)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 1673.00 0.41 2.76 100.0 U2.3-201 snRNA frontal cortex (Tissue)
ENST00000617785.1 ENST00000617785.1_93_187_+ 93–187 895.59 0.22 1.48 33.48 U2.3-201 snRNA frontal cortex (Tissue)
ENST00000617785.1 ENST00000617785.1_1_95_+ 1–95 335379.00 82.92 552.70 99.63 U2.3-201 snRNA frontal cortex (Tissue)
ENST00000617785.1 ENST00000617785.1_99_187_+ 99–187 11.00 0.00 0.02 100.0 U2.3-201 snRNA frontal cortex (Tissue)
ENST00000617785.1 ENST00000617785.1_1_87_+ 1–87 15606.00 3.86 25.72 74.28 U2.3-201 snRNA frontal cortex (Tissue)
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 3518.00 0.87 5.80 38.64 U2.3-201 snRNA frontal cortex (Tissue)
ENST00000617785.1 ENST00000617785.1_1_70_+ 1–70 2826.00 0.70 4.66 82.92 U2.3-201 snRNA frontal cortex (Tissue)
ENST00000617785.1 ENST00000617785.1_95_188_+ 95–188 1874.37 0.46 3.09 70.07 U2.3-201 snRNA frontal cortex (Tissue)
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 686.00 0.17 1.13 100.0 U2.3-201 snRNA frontal cortex (Tissue)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 16.00 0.00 0.03 100.0 U2.3-201 snRNA frontal cortex (Tissue)
ENST00000617785.1 ENST00000617785.1_1_75_+ 1–75 52.00 0.01 0.09 100.0 U2.3-201 snRNA frontal cortex (Tissue)
ENST00000617785.1 ENST00000617785.1_22_116_+ 22–116 195.00 0.05 0.32 100.0 U2.3-201 snRNA frontal cortex (Tissue)
ENST00000617785.1 ENST00000617785.1_1_90_+ 1–90 9692.86 2.40 15.97 44.04 U2.3-201 snRNA frontal cortex (Tissue)
ENST00000617785.1 ENST00000617785.1_1_92_+ 1–92 4857.99 1.20 8.01 36.29 U2.3-201 snRNA frontal cortex (Tissue)