ENCFF001RMM

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000595794.5 ENST00000595794.5_236_320_+ 236–320 148763.38 22.52 245.16 23.03 C19orf48P-203 retained intron frontal cortex (Tissue)
ENST00000595794.5 ENST00000595794.5_236_330_+ 236–330 6809.00 1.03 11.22 92.75 C19orf48P-203 retained intron frontal cortex (Tissue)
ENST00000595794.5 ENST00000595794.5_236_276_+ 236–276 68.00 0.01 0.11 100.0 C19orf48P-203 retained intron frontal cortex (Tissue)
ENST00000595794.5 ENST00000595794.5_230_318_+ 230–318 11.00 0.00 0.02 100.0 C19orf48P-203 retained intron frontal cortex (Tissue)
ENST00000600027.5 ENST00000600027.5_434_519_+ 434–519 1069.00 11.55 1.76 100.0 RPS11-206 retained intron frontal cortex (Tissue)
ENST00000600027.5 ENST00000600027.5_441_519_+ 441–519 7400.00 79.92 12.20 100.0 RPS11-206 retained intron frontal cortex (Tissue)
ENST00000602315.3 ENST00000602315.3_752_771_+ 752–771 10854.00 62.46 17.89 64.55 CARMN-209 lncRNA frontal cortex (Tissue)
ENST00000602478.2 ENST00000602478.2_671_758_+ 671–758 1786.00 37.28 2.94 100.0 ENST00000602478 lncRNA frontal cortex (Tissue)
ENST00000604535.1 ENST00000604535.1_1396_1410_+ 1396–1410 12.00 8.82 0.02 100.0 PPFIA1P1-201 processed pseudogene frontal cortex (Tissue)
ENST00000606412.1 ENST00000606412.1_4_67_+ 4–67 2371.00 59.26 3.91 100.0 SNORD114-21-201 snoRNA frontal cortex (Tissue)
ENST00000606412.1 ENST00000606412.1_35_67_+ 35–67 723.00 18.07 1.19 100.0 SNORD114-21-201 snoRNA frontal cortex (Tissue)
ENST00000606510.1 ENST00000606510.1_2_82_+ 2–82 50204.00 48.33 82.74 100.0 SNORD115-40-201 snoRNA frontal cortex (Tissue)
ENST00000606724.1 ENST00000606724.1_22_43_+ 22–43 16131.00 98.14 26.58 100.0 MIR98-201 miRNA frontal cortex (Tissue)
ENST00000607261.1 ENST00000607261.1_3_73_+ 3–73 31664.00 96.49 52.18 100.0 SNORD113-5-201 snoRNA frontal cortex (Tissue)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 5214.00 90.49 8.59 100.0 MIR15A-201 miRNA frontal cortex (Tissue)
ENST00000607441.3 ENST00000607441.3_43_63_+ 43–63 264.00 80.98 0.44 100.0 MIR376C-201 miRNA frontal cortex (Tissue)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 600.00 58.03 0.99 100.0 SNHG21-206 retained intron frontal cortex (Tissue)
ENST00000607707.1 ENST00000607707.1_5_84_+ 5–84 313.00 27.22 0.52 100.0 SNORD11B-201 snoRNA frontal cortex (Tissue)
ENST00000608459.2 ENST00000608459.2_31_111_+ 31–111 3107.00 71.29 5.12 100.0 SNORD91B-201 snoRNA frontal cortex (Tissue)
ENST00000608502.2 ENST00000608502.2_858_879_+ 858–879 44.00 56.41 0.07 100.0 MIR219A2HG-201 lncRNA frontal cortex (Tissue)
ENST00000609620.2 ENST00000609620.2_7_86_+ 7–86 24967.00 63.79 41.15 72.94 SNORD91A-201 snoRNA frontal cortex (Tissue)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 9689.00 46.24 15.97 96.78 MIR486-1-201 miRNA frontal cortex (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 34873.00 29.26 57.47 68.63 NOP56-219 retained intron frontal cortex (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 1636.00 1.37 2.70 100.0 NOP56-219 retained intron frontal cortex (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 2121.00 1.78 3.50 100.0 NOP56-219 retained intron frontal cortex (Tissue)