ENCFF001RMM

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 686.00 33.64 1.13 100.0 ENST00000570843 lncRNA frontal cortex (Tissue)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 3144.00 70.15 5.18 100.0 MIR497HG-207 lncRNA frontal cortex (Tissue)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 90763.00 99.07 149.58 99.53 MIR22HG-212 lncRNA frontal cortex (Tissue)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 1365.00 0.90 2.25 77.34 SNORD53B-201 snoRNA frontal cortex (Tissue)
ENST00000577887.1 ENST00000577887.1_1_76_+ 1–76 138089.00 91.45 227.57 93.57 SNORD53B-201 snoRNA frontal cortex (Tissue)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 400.00 0.26 0.66 22.66 SNORD53B-201 snoRNA frontal cortex (Tissue)
ENST00000578036.5 ENST00000578036.5_3605_3616_+ 3605–3616 471.00 83.81 0.78 100.0 ENST00000578036 lncRNA frontal cortex (Tissue)
ENST00000578181.1 ENST00000578181.1_477_541_+ 477–541 5381.00 89.95 8.87 100.0 RPL23A-207 protein coding frontal cortex (Tissue)
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 2872.00 90.49 4.73 100.0 MIR744-201 miRNA frontal cortex (Tissue)
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 44.00 66.67 0.07 100.0 MIR378C-201 miRNA frontal cortex (Tissue)
ENST00000579003.2 ENST00000579003.2_1221_1241_+ 1221–1241 67.00 4.77 0.11 14.35 MIR142HG-201 lncRNA frontal cortex (Tissue)
ENST00000579003.2 ENST00000579003.2_1219_1238_+ 1219–1238 1009.00 71.87 1.66 80.21 MIR142HG-201 lncRNA frontal cortex (Tissue)
ENST00000579003.2 ENST00000579003.2_1257_1279_+ 1257–1279 2.00 0.14 0.00 100.0 MIR142HG-201 lncRNA frontal cortex (Tissue)
ENST00000580533.1 ENST00000580533.1_1_91_+ 1–91 769.00 6.52 1.27 100.0 SNORD3C-201 snoRNA frontal cortex (Tissue)
ENST00000580755.1 ENST00000580755.1_131_199_+ 131–199 227.03 0.07 0.37 44.08 RPL23A-208 retained intron frontal cortex (Tissue)
ENST00000580755.1 ENST00000580755.1_132_190_+ 132–190 232961.00 75.91 383.92 89.35 RPL23A-208 retained intron frontal cortex (Tissue)
ENST00000580755.1 ENST00000580755.1_131_193_+ 131–193 70539.00 22.99 116.25 93.08 RPL23A-208 retained intron frontal cortex (Tissue)
ENST00000580755.1 ENST00000580755.1_131_197_+ 131–197 571.98 0.19 0.94 68.5 RPL23A-208 retained intron frontal cortex (Tissue)
ENST00000581072.6 ENST00000581072.6_810_831_+ 810–831 17.00 1.84 0.03 100.0 MIR133A1HG-202 lncRNA frontal cortex (Tissue)
ENST00000581305.1 ENST00000581305.1_127_196_+ 127–196 496.00 0.17 0.82 100.0 RPL17-211 retained intron frontal cortex (Tissue)
ENST00000581305.1 ENST00000581305.1_509_570_+ 509–570 15680.00 5.52 25.84 47.18 RPL17-211 retained intron frontal cortex (Tissue)
ENST00000581305.1 ENST00000581305.1_127_189_+ 127–189 39484.00 13.91 65.07 57.67 RPL17-211 retained intron frontal cortex (Tissue)
ENST00000581305.1 ENST00000581305.1_127_192_+ 127–192 125445.00 44.20 206.73 94.44 RPL17-211 retained intron frontal cortex (Tissue)
ENST00000581305.1 ENST00000581305.1_509_573_+ 509–573 95881.00 33.78 158.01 96.71 RPL17-211 retained intron frontal cortex (Tissue)
ENST00000582320.4 ENST00000582320.4_575_597_+ 575–597 2904.00 51.19 4.79 73.41 ENST00000582320 lncRNA frontal cortex (Tissue)