ENCFF001RMM

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000554988.2 ENST00000554988.2_275_368_+ 275–368 2369.00 14.95 3.90 100.0 ENST00000554988 lncRNA frontal cortex (Tissue)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 1244.00 0.70 2.05 100.0 SNHG14-220 retained intron frontal cortex (Tissue)
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 40148.00 22.57 66.16 100.0 SNHG14-220 retained intron frontal cortex (Tissue)
ENST00000557108.6 ENST00000557108.6_1419_1490_+ 1419–1490 129332.00 72.71 213.14 100.0 SNHG14-220 retained intron frontal cortex (Tissue)
ENST00000557108.6 ENST00000557108.6_4525_4590_+ 4525–4590 1074.00 0.60 1.77 100.0 SNHG14-220 retained intron frontal cortex (Tissue)
ENST00000559466.1 ENST00000559466.1_665_676_+ 665–676 2035.00 98.74 3.35 100.0 TEKT4P2-201 transcribed unprocessed pseudogene frontal cortex (Tissue)
ENST00000561554.5 ENST00000561554.5_316_344_+ 316–344 348.00 0.09 0.57 100.0 RPL4-202 retained intron frontal cortex (Tissue)
ENST00000561554.5 ENST00000561554.5_276_321_+ 276–321 23.00 0.01 0.04 100.0 RPL4-202 retained intron frontal cortex (Tissue)
ENST00000561554.5 ENST00000561554.5_276_344_+ 276–344 367675.00 96.93 605.93 99.29 RPL4-202 retained intron frontal cortex (Tissue)
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 211.00 0.06 0.35 100.0 RPL4-202 retained intron frontal cortex (Tissue)
ENST00000561554.5 ENST00000561554.5_311_344_+ 311–344 864.00 0.23 1.42 100.0 RPL4-202 retained intron frontal cortex (Tissue)
ENST00000563103.1 ENST00000563103.1_221_256_+ 221–256 5.00 0.06 0.01 100.0 ENST00000563103 lncRNA frontal cortex (Tissue)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 241.00 1.18 0.40 100.0 RPL4-207 retained intron frontal cortex (Tissue)
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 15686.00 77.02 25.85 100.0 RPL4-207 retained intron frontal cortex (Tissue)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 1969.00 55.43 3.24 93.81 ENST00000565336 lncRNA frontal cortex (Tissue)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 961.00 27.06 1.58 86.19 ENST00000565336 lncRNA frontal cortex (Tissue)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 439622.00 83.72 724.50 86.62 RBMX-210 retained intron frontal cortex (Tissue)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 2894.00 0.55 4.77 100.0 RBMX-210 retained intron frontal cortex (Tissue)
ENST00000565907.1 ENST00000565907.1_307_388_+ 307–388 858.00 0.16 1.41 100.0 RBMX-210 retained intron frontal cortex (Tissue)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 3698.00 0.70 6.09 100.0 RBMX-210 retained intron frontal cortex (Tissue)
ENST00000567229.5 ENST00000567229.5_485_573_+ 485–573 4871.00 57.03 8.03 100.0 RPL4-214 retained intron frontal cortex (Tissue)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 1112.00 13.02 1.83 100.0 RPL4-214 retained intron frontal cortex (Tissue)
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 437.00 2.98 0.72 100.0 POLG-DT-202 lncRNA frontal cortex (Tissue)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 6068.64 41.43 10.00 71.51 POLG-DT-202 lncRNA frontal cortex (Tissue)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 3926.59 26.81 6.47 43.47 POLG-DT-202 lncRNA frontal cortex (Tissue)