ENCFF001RMM

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000391145.1 ENST00000391145.1_18_97_+ 18–97 186244.00 95.15 306.93 100.0 SNORD90-201 snoRNA frontal cortex (Tissue)
ENST00000391145.1 ENST00000391145.1_18_100_+ 18–100 4158.00 2.12 6.85 26.25 SNORD90-201 snoRNA frontal cortex (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 1546.00 1.15 2.55 100.0 SNORD69-201 snoRNA frontal cortex (Tissue)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 1573.00 1.17 2.59 100.0 SNORD69-201 snoRNA frontal cortex (Tissue)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 125485.00 92.96 206.80 100.0 SNORD69-201 snoRNA frontal cortex (Tissue)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 1607.00 1.19 2.65 100.0 SNORD69-201 snoRNA frontal cortex (Tissue)
ENST00000391232.1 ENST00000391232.1_9_80_+ 9–80 2620.00 58.93 4.32 69.68 SNORD70-201 snoRNA frontal cortex (Tissue)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 8081.00 76.01 13.32 86.12 B4GALNT2-202 protein coding frontal cortex (Tissue)
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 530.00 4.99 0.87 100.0 B4GALNT2-202 protein coding frontal cortex (Tissue)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 3589.00 89.57 5.91 100.0 NDE1-202 protein coding frontal cortex (Tissue)
ENST00000401172.1 ENST00000401172.1_46_67_+ 46–67 15.00 78.95 0.02 100.0 MIR208B-201 miRNA frontal cortex (Tissue)
ENST00000401182.3 ENST00000401182.3_11_31_+ 11–31 165.00 67.07 0.27 100.0 MIR450B-201 miRNA frontal cortex (Tissue)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 408.00 58.62 0.67 100.0 MIR887-201 miRNA frontal cortex (Tissue)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 4002.00 90.85 6.60 100.0 MIR889-201 miRNA frontal cortex (Tissue)
ENST00000408139.1 ENST00000408139.1_5_91_+ 5–91 7557.00 85.21 12.45 100.0 SNORD111-201 snoRNA frontal cortex (Tissue)
ENST00000408314.1 ENST00000408314.1_5_86_+ 5–86 2083.00 60.78 3.43 82.43 SNORD88A-201 snoRNA frontal cortex (Tissue)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 341.00 94.99 0.56 100.0 MIR548K-201 miRNA frontal cortex (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 511.00 60.26 0.84 100.0 MIR320B2-201 miRNA frontal cortex (Tissue)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 10339.00 94.27 17.04 100.0 MIR1271-201 miRNA frontal cortex (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 366.00 0.30 0.60 100.0 SNORD100-201 snoRNA frontal cortex (Tissue)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 114473.00 95.36 188.65 100.0 SNORD100-201 snoRNA frontal cortex (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 1883.00 1.57 3.10 100.0 SNORD100-201 snoRNA frontal cortex (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 351.00 0.29 0.58 100.0 SNORD100-201 snoRNA frontal cortex (Tissue)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 1878.00 64.23 3.09 100.0 SNORD111B-201 snoRNA frontal cortex (Tissue)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 54.00 1.21 0.09 100.0 RNU2-36P-201 snRNA frontal cortex (Tissue)