ENCFF001RMM

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 314.00 0.03 0.52 100.0 MT-TE-201 Mt tRNA frontal cortex (Tissue)
ENST00000387459.1 ENST00000387459.1_40_67_+ 40–67 310.00 0.03 0.51 11.05 MT-TE-201 Mt tRNA frontal cortex (Tissue)
ENST00000387459.1 ENST00000387459.1_24_69_+ 24–69 4706.00 0.41 7.76 100.0 MT-TE-201 Mt tRNA frontal cortex (Tissue)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 1002335.00 88.08 1651.85 92.55 MT-TE-201 Mt tRNA frontal cortex (Tissue)
ENST00000387459.1 ENST00000387459.1_39_69_+ 39–69 2496.00 0.22 4.11 91.53 MT-TE-201 Mt tRNA frontal cortex (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 1761.00 18.87 2.90 100.0 MT-RNR1-201 Mt rRNA frontal cortex (Tissue)
ENST00000389680.2 ENST00000389680.2_2_90_+ 2–90 149.00 1.60 0.25 100.0 MT-RNR1-201 Mt rRNA frontal cortex (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 3322.00 79.11 5.47 100.0 MIR454-201 miRNA frontal cortex (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 846.00 70.44 1.39 100.0 MIR501-201 miRNA frontal cortex (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 13193.00 93.28 21.74 100.0 MIR769-201 miRNA frontal cortex (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 94.00 75.20 0.15 100.0 KRTAP19-1-201 protein coding frontal cortex (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 1204.00 14.60 1.98 100.0 MIR708-201 miRNA frontal cortex (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 21.00 84.00 0.03 100.0 MIR509-3-201 miRNA frontal cortex (Tissue)
ENST00000390751.3 ENST00000390751.3_47_68_+ 47–68 85.00 42.29 0.14 100.0 MIR543-201 miRNA frontal cortex (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 1068.00 96.04 1.76 100.0 MIR301B-201 miRNA frontal cortex (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 3238.00 59.50 5.34 85.96 RNU1-82P-201 snRNA frontal cortex (Tissue)
ENST00000390856.1 ENST00000390856.1_1_75_+ 1–75 3689.00 27.81 6.08 100.0 SNORD66-201 snoRNA frontal cortex (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 436.00 3.29 0.72 100.0 SNORD66-201 snoRNA frontal cortex (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 30.00 0.23 0.05 100.0 SNORD66-201 snoRNA frontal cortex (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 4172.00 31.45 6.88 79.63 SNORD66-201 snoRNA frontal cortex (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 799.00 82.29 1.32 100.0 U3.17-201 snoRNA frontal cortex (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 2050.00 50.05 3.38 100.0 SNORD17-201 snoRNA frontal cortex (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 418.00 76.42 0.69 100.0 SNORD72-201 snoRNA frontal cortex (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 5454.00 81.26 8.99 100.0 SNORD70B-201 snoRNA frontal cortex (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 9682.00 76.81 15.96 96.67 RNY4P18-201 misc RNA frontal cortex (Tissue)