ENCFF001RMK

Library Details

Organism: Homo Sapiens
Biosample: heart (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFT
Description: Part of ENCODE experiment ENCSR000AFT. The libraries contained in this experiment come from human fetal heart tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000699460.1 ENST00000699460.1_2148_2169_+ 2148–2169 110.00 14.91 0.19 100.0 MEG9-206 lncRNA heart (Tissue)
ENST00000703637.1 ENST00000703637.1_459_481_+ 459–481 2021.00 13.34 3.51 100.0 DNAJC5-203 nonsense mediated decay heart (Tissue)
ENST00000707189.1 ENST00000707189.1_1316_1333_+ 1316–1333 6813.00 61.15 11.82 100.0 ENST00000707189 TEC heart (Tissue)
ENST00000710424.1 ENST00000710424.1_1932_2007_+ 1932–2007 59.00 0.02 0.10 100.0 MIR17HG-214 lncRNA heart (Tissue)
ENST00000710424.1 ENST00000710424.1_2162_2183_+ 2162–2183 115608.57 44.04 200.63 48.17 MIR17HG-214 lncRNA heart (Tissue)
ENST00000710424.1 ENST00000710424.1_1557_1579_+ 1557–1579 98.00 0.04 0.17 100.0 MIR17HG-214 lncRNA heart (Tissue)
ENST00000710424.1 ENST00000710424.1_1740_1762_+ 1740–1762 788.00 0.30 1.37 100.0 MIR17HG-214 lncRNA heart (Tissue)
ENST00000710424.1 ENST00000710424.1_2162_2185_+ 2162–2185 132224.77 50.37 229.46 54.14 MIR17HG-214 lncRNA heart (Tissue)
ENST00000710424.1 ENST00000710424.1_2046_2067_+ 2046–2067 7110.00 2.71 12.34 100.0 MIR17HG-214 lncRNA heart (Tissue)
ENST00000710424.1 ENST00000710424.1_2069_2124_+ 2069–2124 50.00 0.02 0.09 100.0 MIR17HG-214 lncRNA heart (Tissue)
ENST00000710424.1 ENST00000710424.1_1873_1895_+ 1873–1895 2152.00 0.82 3.73 100.0 MIR17HG-214 lncRNA heart (Tissue)
ENST00000710424.1 ENST00000710424.1_1419_1441_+ 1419–1441 1542.00 0.59 2.68 100.0 MIR17HG-214 lncRNA heart (Tissue)
ENST00000718227.1 ENST00000718227.1_356_384_+ 356–384 8667.00 1.89 15.04 100.0 SNHG32-223 lncRNA heart (Tissue)
ENST00000718227.1 ENST00000718227.1_387_419_+ 387–419 7695.00 1.68 13.35 100.0 SNHG32-223 lncRNA heart (Tissue)
ENST00000718227.1 ENST00000718227.1_359_419_+ 359–419 456.00 0.10 0.79 100.0 SNHG32-223 lncRNA heart (Tissue)
ENST00000718227.1 ENST00000718227.1_352_421_+ 352–421 4038.00 0.88 7.01 71.52 SNHG32-223 lncRNA heart (Tissue)
ENST00000718227.1 ENST00000718227.1_356_419_+ 356–419 430712.00 93.77 747.45 100.0 SNHG32-223 lncRNA heart (Tissue)
ENST00000718231.1 ENST00000718231.1_1950_2016_+ 1950–2016 110952.00 80.62 192.55 98.2 SNHG32-227 lncRNA heart (Tissue)
ENST00000718231.1 ENST00000718231.1_1988_2016_+ 1988–2016 15855.00 11.52 27.51 100.0 SNHG32-227 lncRNA heart (Tissue)
ENST00000718231.1 ENST00000718231.1_1955_2016_+ 1955–2016 989.00 0.72 1.72 100.0 SNHG32-227 lncRNA heart (Tissue)
ENST00000718231.1 ENST00000718231.1_1964_2016_+ 1964–2016 1369.00 0.99 2.38 100.0 SNHG32-227 lncRNA heart (Tissue)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 131.00 71.98 0.23 100.0 B4GALT1-203 nonsense mediated decay heart (Tissue)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 1827.00 8.69 3.17 100.0 ENST00000722183 lncRNA heart (Tissue)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 10431.00 49.61 18.10 92.31 ENST00000722183 lncRNA heart (Tissue)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 1130.00 5.37 1.96 100.0 ENST00000722183 lncRNA heart (Tissue)