ENCFF001RMK

Library Details

Organism: Homo Sapiens
Biosample: heart (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFT
Description: Part of ENCODE experiment ENCSR000AFT. The libraries contained in this experiment come from human fetal heart tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000685307.3 ENST00000685307.3_1198_1226_+ 1198–1226 285.00 18.90 0.49 100.0 SNHG10-212 lncRNA heart (Tissue)
ENST00000686899.3 ENST00000686899.3_568_649_+ 568–649 43756.13 47.75 75.93 53.4 SNHG19-202 lncRNA heart (Tissue)
ENST00000686899.3 ENST00000686899.3_568_647_+ 568–647 37996.11 41.46 65.94 59.72 SNHG19-202 lncRNA heart (Tissue)
ENST00000686899.3 ENST00000686899.3_562_648_+ 562–648 8.39 0.01 0.01 93.24 SNHG19-202 lncRNA heart (Tissue)
ENST00000686899.3 ENST00000686899.3_562_650_+ 562–650 0.72 0.00 0.00 72.05 SNHG19-202 lncRNA heart (Tissue)
ENST00000688264.3 ENST00000688264.3_548_571_+ 548–571 7212.00 22.31 12.52 100.0 MIR222HG-206 lncRNA heart (Tissue)
ENST00000688264.3 ENST00000688264.3_1402_1424_+ 1402–1424 18152.00 56.14 31.50 84.13 MIR222HG-206 lncRNA heart (Tissue)
ENST00000688264.3 ENST00000688264.3_1362_1387_+ 1362–1387 639.00 1.98 1.11 100.0 MIR222HG-206 lncRNA heart (Tissue)
ENST00000688371.3 ENST00000688371.3_458_485_+ 458–485 4.00 1.05 0.01 100.0 MIR302CHG-205 lncRNA heart (Tissue)
ENST00000688371.3 ENST00000688371.3_313_335_+ 313–335 6.00 1.58 0.01 35.29 MIR302CHG-205 lncRNA heart (Tissue)
ENST00000688371.3 ENST00000688371.3_190_212_+ 190–212 35.91 9.45 0.06 52.05 MIR302CHG-205 lncRNA heart (Tissue)
ENST00000688371.3 ENST00000688371.3_313_333_+ 313–333 11.00 2.89 0.02 84.62 MIR302CHG-205 lncRNA heart (Tissue)
ENST00000688371.3 ENST00000688371.3_190_210_+ 190–210 31.16 8.20 0.05 57.71 MIR302CHG-205 lncRNA heart (Tissue)
ENST00000688371.3 ENST00000688371.3_493_514_+ 493–514 48.00 12.63 0.08 100.0 MIR302CHG-205 lncRNA heart (Tissue)
ENST00000688371.3 ENST00000688371.3_673_694_+ 673–694 55.00 14.47 0.10 100.0 MIR302CHG-205 lncRNA heart (Tissue)
ENST00000688371.3 ENST00000688371.3_458_478_+ 458–478 128.00 33.68 0.22 90.14 MIR302CHG-205 lncRNA heart (Tissue)
ENST00000688371.3 ENST00000688371.3_458_490_+ 458–490 2.00 0.53 0.00 100.0 MIR302CHG-205 lncRNA heart (Tissue)
ENST00000688371.3 ENST00000688371.3_458_481_+ 458–481 22.00 5.79 0.04 33.33 MIR302CHG-205 lncRNA heart (Tissue)
ENST00000697734.1 ENST00000697734.1_1838_1871_+ 1838–1871 1.00 0.94 0.00 100.0 RPSA-216 retained intron heart (Tissue)
ENST00000697879.1 ENST00000697879.1_547_564_+ 547–564 2718.00 4.25 4.72 87.03 MIR99AHG-370 lncRNA heart (Tissue)
ENST00000697879.1 ENST00000697879.1_547_568_+ 547–568 59034.00 92.38 102.45 98.53 MIR99AHG-370 lncRNA heart (Tissue)
ENST00000699245.1 ENST00000699245.1_739_776_+ 739–776 873.00 93.07 1.51 100.0 HPS4-237 retained intron heart (Tissue)
ENST00000699458.1 ENST00000699458.1_1475_1492_+ 1475–1492 584.00 87.82 1.01 100.0 MEG8-253 lncRNA heart (Tissue)
ENST00000699460.1 ENST00000699460.1_1623_1644_+ 1623–1644 110.00 14.91 0.19 100.0 MEG9-206 lncRNA heart (Tissue)
ENST00000699460.1 ENST00000699460.1_1872_1893_+ 1872–1893 71.00 9.62 0.12 100.0 MEG9-206 lncRNA heart (Tissue)