ENCFF001RMK

Library Details

Organism: Homo Sapiens
Biosample: heart (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFT
Description: Part of ENCODE experiment ENCSR000AFT. The libraries contained in this experiment come from human fetal heart tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 115761.93 58.42 200.89 72.01 SNHG5-273 lncRNA heart (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 11007.00 5.55 19.10 84.42 SNHG5-273 lncRNA heart (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 170.00 0.09 0.30 100.0 SNHG5-273 lncRNA heart (Tissue)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 2560.00 1.29 4.44 100.0 SNHG5-273 lncRNA heart (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 68.00 0.03 0.12 100.0 SNHG5-273 lncRNA heart (Tissue)
ENST00000668505.1 ENST00000668505.1_1272_1352_+ 1272–1352 2.00 0.00 0.00 100.0 SNHG5-273 lncRNA heart (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1361_+ 1278–1361 2746.00 1.39 4.77 97.34 SNHG5-273 lncRNA heart (Tissue)
ENST00000669673.1 ENST00000669673.1_3794_3884_+ 3794–3884 1867.00 12.16 3.24 69.66 SNHG14-323 lncRNA heart (Tissue)
ENST00000670680.1 ENST00000670680.1_34_69_+ 34–69 1168.00 0.29 2.03 65.43 MEG8-251 lncRNA heart (Tissue)
ENST00000670680.1 ENST00000670680.1_2_69_+ 2–69 382553.00 95.69 663.88 98.72 MEG8-251 lncRNA heart (Tissue)
ENST00000670680.1 ENST00000670680.1_36_69_+ 36–69 846.00 0.21 1.47 47.72 MEG8-251 lncRNA heart (Tissue)
ENST00000670680.1 ENST00000670680.1_1539_1602_+ 1539–1602 3132.00 0.78 5.44 86.9 MEG8-251 lncRNA heart (Tissue)
ENST00000670680.1 ENST00000670680.1_10_70_+ 10–70 658.00 0.16 1.14 100.0 MEG8-251 lncRNA heart (Tissue)
ENST00000670697.1 ENST00000670697.1_233_310_+ 233–310 41676.00 54.64 72.32 88.08 SNHG14-336 lncRNA heart (Tissue)
ENST00000670697.1 ENST00000670697.1_232_313_+ 232–313 26799.00 35.13 46.51 51.83 SNHG14-336 lncRNA heart (Tissue)
ENST00000671491.1 ENST00000671491.1_1778_1868_+ 1778–1868 21235.00 69.58 36.85 96.63 SNHG14-341 lncRNA heart (Tissue)
ENST00000676514.1 ENST00000676514.1_1978_2054_+ 1978–2054 1992.00 36.20 3.46 100.0 NCL-211 retained intron heart (Tissue)
ENST00000679646.1 ENST00000679646.1_899_921_+ 899–921 1235.00 30.59 2.14 100.0 FMN2-209 protein coding CDS not defined heart (Tissue)
ENST00000685142.3 ENST00000685142.3_1449_1480_+ 1449–1480 12.00 0.04 0.02 100.0 LINC02739-203 lncRNA heart (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1423_+ 1409–1423 1259.00 4.68 2.18 73.45 LINC02739-203 lncRNA heart (Tissue)
ENST00000685142.3 ENST00000685142.3_1421_1436_+ 1421–1436 424.00 1.58 0.74 100.0 LINC02739-203 lncRNA heart (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1440_+ 1409–1440 11231.00 41.76 19.49 100.0 LINC02739-203 lncRNA heart (Tissue)
ENST00000685142.3 ENST00000685142.3_1405_1444_+ 1405–1444 783.00 2.91 1.36 100.0 LINC02739-203 lncRNA heart (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1421_+ 1409–1421 455.00 1.69 0.79 26.55 LINC02739-203 lncRNA heart (Tissue)
ENST00000685227.3 ENST00000685227.3_1036_1055_+ 1036–1055 32.00 72.73 0.06 100.0 MIR124-1HG-216 lncRNA heart (Tissue)