ENCFF001RMK

Library Details

Organism: Homo Sapiens
Biosample: heart (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFT
Description: Part of ENCODE experiment ENCSR000AFT. The libraries contained in this experiment come from human fetal heart tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_1048_1118_+ 1048–1118 545.00 0.04 0.95 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 1262.00 20.32 2.19 100.0 FTX-219 lncRNA heart (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 2563.00 41.27 4.45 87.3 FTX-219 lncRNA heart (Tissue)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 133.00 1.93 0.23 42.36 CTC1-214 protein coding heart (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 21.00 0.31 0.04 20.0 CTC1-214 protein coding heart (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 1912.00 27.79 3.32 68.29 CTC1-214 protein coding heart (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 181.00 2.63 0.31 57.64 CTC1-214 protein coding heart (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 1452.00 21.10 2.52 62.97 CTC1-214 protein coding heart (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 46.00 0.67 0.08 100.0 CTC1-214 protein coding heart (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 276.00 4.01 0.48 100.0 CTC1-214 protein coding heart (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 308.00 4.48 0.53 100.0 CTC1-214 protein coding heart (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 725.00 0.85 1.26 68.33 ENST00000651540 lncRNA heart (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 740.00 0.86 1.28 98.8 ENST00000651540 lncRNA heart (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 5264.00 6.15 9.14 100.0 ENST00000651540 lncRNA heart (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 3176.00 3.71 5.51 59.87 ENST00000651540 lncRNA heart (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 594.00 0.69 1.03 100.0 ENST00000651540 lncRNA heart (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 1081.00 1.26 1.88 100.0 ENST00000651540 lncRNA heart (Tissue)
ENST00000651540.1 ENST00000651540.1_6_79_+ 6–79 627.00 0.73 1.09 100.0 ENST00000651540 lncRNA heart (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 2452.00 2.86 4.26 100.0 ENST00000651540 lncRNA heart (Tissue)
ENST00000651540.1 ENST00000651540.1_6_88_+ 6–88 2033.00 2.37 3.53 100.0 ENST00000651540 lncRNA heart (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 13741.00 16.05 23.85 54.84 ENST00000651540 lncRNA heart (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 7248.00 8.47 12.58 100.0 ENST00000651540 lncRNA heart (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 23605.00 27.57 40.96 74.63 ENST00000651540 lncRNA heart (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 20771.00 2.39 36.05 100.0 MIRLET7A1HG-203 lncRNA heart (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 17939.00 91.73 31.13 100.0 MEG8-225 lncRNA heart (Tissue)