ENCFF001RMK

Library Details

Organism: Homo Sapiens
Biosample: heart (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFT
Description: Part of ENCODE experiment ENCSR000AFT. The libraries contained in this experiment come from human fetal heart tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000557108.6 ENST00000557108.6_1419_1490_+ 1419–1490 57717.00 51.91 100.16 100.0 SNHG14-220 retained intron heart (Tissue)
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 40803.00 36.70 70.81 100.0 SNHG14-220 retained intron heart (Tissue)
ENST00000559466.1 ENST00000559466.1_665_676_+ 665–676 1659.00 99.58 2.88 100.0 TEKT4P2-201 transcribed unprocessed pseudogene heart (Tissue)
ENST00000561554.5 ENST00000561554.5_276_344_+ 276–344 282890.00 96.48 490.93 99.56 RPL4-202 retained intron heart (Tissue)
ENST00000561554.5 ENST00000561554.5_276_321_+ 276–321 11.00 0.00 0.02 100.0 RPL4-202 retained intron heart (Tissue)
ENST00000561554.5 ENST00000561554.5_311_344_+ 311–344 555.00 0.19 0.96 100.0 RPL4-202 retained intron heart (Tissue)
ENST00000561554.5 ENST00000561554.5_316_344_+ 316–344 559.00 0.19 0.97 100.0 RPL4-202 retained intron heart (Tissue)
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 212.00 0.07 0.37 100.0 RPL4-202 retained intron heart (Tissue)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 255.00 1.51 0.44 100.0 RPL4-207 retained intron heart (Tissue)
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 12335.00 73.19 21.41 100.0 RPL4-207 retained intron heart (Tissue)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 3689.00 6.77 6.40 80.74 ENST00000565336 lncRNA heart (Tissue)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 43415.00 79.64 75.34 95.68 ENST00000565336 lncRNA heart (Tissue)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 5832.00 1.10 10.12 100.0 RBMX-210 retained intron heart (Tissue)
ENST00000565907.1 ENST00000565907.1_307_388_+ 307–388 720.00 0.14 1.25 100.0 RBMX-210 retained intron heart (Tissue)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 477159.00 89.90 828.06 94.31 RBMX-210 retained intron heart (Tissue)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 2963.00 0.56 5.14 100.0 RBMX-210 retained intron heart (Tissue)
ENST00000567229.5 ENST00000567229.5_485_573_+ 485–573 2326.00 44.77 4.04 100.0 RPL4-214 retained intron heart (Tissue)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 1204.00 23.18 2.09 100.0 RPL4-214 retained intron heart (Tissue)
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 343.00 1.33 0.60 100.0 POLG-DT-202 lncRNA heart (Tissue)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 11184.85 43.48 19.41 64.66 POLG-DT-202 lncRNA heart (Tissue)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 6297.10 24.48 10.93 37.37 POLG-DT-202 lncRNA heart (Tissue)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 18357.00 78.99 31.86 100.0 ENST00000570843 lncRNA heart (Tissue)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 5239.00 62.73 9.09 100.0 MIR497HG-207 lncRNA heart (Tissue)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 642411.00 99.24 1114.84 99.72 MIR22HG-212 lncRNA heart (Tissue)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 742.00 1.46 1.29 67.15 SNORD53B-201 snoRNA heart (Tissue)