ENCFF001RMK

Library Details

Organism: Homo Sapiens
Biosample: heart (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFT
Description: Part of ENCODE experiment ENCSR000AFT. The libraries contained in this experiment come from human fetal heart tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000485101.5 ENST00000485101.5_343_408_+ 343–408 227394.00 18.62 394.62 76.71 EIF4A2-219 retained intron heart (Tissue)
ENST00000485101.5 ENST00000485101.5_343_376_+ 343–376 1044.00 0.09 1.81 100.0 EIF4A2-219 retained intron heart (Tissue)
ENST00000485101.5 ENST00000485101.5_343_413_+ 343–413 1616.00 0.13 2.80 100.0 EIF4A2-219 retained intron heart (Tissue)
ENST00000485101.5 ENST00000485101.5_360_408_+ 360–408 1686.00 0.14 2.93 72.05 EIF4A2-219 retained intron heart (Tissue)
ENST00000485101.5 ENST00000485101.5_343_390_+ 343–390 7380.00 0.60 12.81 86.64 EIF4A2-219 retained intron heart (Tissue)
ENST00000485101.5 ENST00000485101.5_365_405_+ 365–405 46885.00 3.84 81.36 85.3 EIF4A2-219 retained intron heart (Tissue)
ENST00000485101.5 ENST00000485101.5_343_405_+ 343–405 831942.00 68.12 1443.75 97.86 EIF4A2-219 retained intron heart (Tissue)
ENST00000485101.5 ENST00000485101.5_343_418_+ 343–418 5341.00 0.44 9.27 100.0 EIF4A2-219 retained intron heart (Tissue)
ENST00000485101.5 ENST00000485101.5_365_408_+ 365–408 4208.00 0.34 7.30 44.85 EIF4A2-219 retained intron heart (Tissue)
ENST00000485101.5 ENST00000485101.5_343_434_+ 343–434 29.00 0.00 0.05 100.0 EIF4A2-219 retained intron heart (Tissue)
ENST00000485101.5 ENST00000485101.5_2108_2152_+ 2108–2152 707.00 0.06 1.23 100.0 EIF4A2-219 retained intron heart (Tissue)
ENST00000485101.5 ENST00000485101.5_362_405_+ 362–405 13235.00 1.08 22.97 65.75 EIF4A2-219 retained intron heart (Tissue)
ENST00000485390.5 ENST00000485390.5_230_303_+ 230–303 16257.00 96.22 28.21 100.0 RPS8-207 protein coding CDS not defined heart (Tissue)
ENST00000485706.5 ENST00000485706.5_456_485_+ 456–485 165.00 4.22 0.29 100.0 RPL7A-206 protein coding CDS not defined heart (Tissue)
ENST00000485706.5 ENST00000485706.5_486_524_+ 486–524 1709.00 43.69 2.97 100.0 RPL7A-206 protein coding CDS not defined heart (Tissue)
ENST00000485706.5 ENST00000485706.5_456_524_+ 456–524 521.00 13.32 0.90 100.0 RPL7A-206 protein coding CDS not defined heart (Tissue)
ENST00000485756.1 ENST00000485756.1_122_192_+ 122–192 155526.00 24.43 269.90 99.67 RPL21-209 retained intron heart (Tissue)
ENST00000485756.1 ENST00000485756.1_123_189_+ 123–189 470088.00 73.83 815.79 98.19 RPL21-209 retained intron heart (Tissue)
ENST00000485756.1 ENST00000485756.1_173_189_+ 173–189 1133.00 0.18 1.97 100.0 RPL21-209 retained intron heart (Tissue)
ENST00000485756.1 ENST00000485756.1_123_168_+ 123–168 2288.00 0.36 3.97 100.0 RPL21-209 retained intron heart (Tissue)
ENST00000485756.1 ENST00000485756.1_138_189_+ 138–189 1459.00 0.23 2.53 100.0 RPL21-209 retained intron heart (Tissue)
ENST00000486255.1 ENST00000486255.1_1073_1096_+ 1073–1096 1115.00 21.85 1.93 100.0 GABRE-209 retained intron heart (Tissue)
ENST00000488946.1 ENST00000488946.1_155_235_+ 155–235 184901.00 85.99 320.88 98.4 RPL13A-212 retained intron heart (Tissue)
ENST00000488946.1 ENST00000488946.1_148_235_+ 148–235 3.00 0.00 0.01 100.0 RPL13A-212 retained intron heart (Tissue)
ENST00000488946.1 ENST00000488946.1_844_886_+ 844–886 3.00 0.00 0.01 100.0 RPL13A-212 retained intron heart (Tissue)