ENCFF001RMK

Library Details

Organism: Homo Sapiens
Biosample: heart (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFT
Description: Part of ENCODE experiment ENCSR000AFT. The libraries contained in this experiment come from human fetal heart tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000453082.5 ENST00000453082.5_267_347_+ 267–347 1221.00 33.12 2.12 100.0 SNHG14-207 lncRNA heart (Tissue)
ENST00000458770.1 ENST00000458770.1_7_74_+ 7–74 105604.00 94.02 183.26 97.94 SNORD105B-201 snoRNA heart (Tissue)
ENST00000458838.1 ENST00000458838.1_8_75_+ 8–75 5663.00 51.98 9.83 67.58 SNORD121B-201 snoRNA heart (Tissue)
ENST00000458892.1 ENST00000458892.1_5_39_+ 5–39 6817.00 6.23 11.83 100.0 SNORD127-201 snoRNA heart (Tissue)
ENST00000458892.1 ENST00000458892.1_5_80_+ 5–80 96915.00 88.56 168.19 99.26 SNORD127-201 snoRNA heart (Tissue)
ENST00000458893.1 ENST00000458893.1_3_64_+ 3–64 31311.00 91.18 54.34 100.0 SNORD42B-201 snoRNA heart (Tissue)
ENST00000459254.1 ENST00000459254.1_69_90_+ 69–90 258.00 1.35 0.45 100.0 RNY4P25-201 misc RNA heart (Tissue)
ENST00000459386.1 ENST00000459386.1_9_73_+ 9–73 1528.00 57.08 2.65 100.0 SNORD121A-201 snoRNA heart (Tissue)
ENST00000459475.1 ENST00000459475.1_4_75_+ 4–75 8465.00 27.46 14.69 65.12 SNORD126-201 snoRNA heart (Tissue)
ENST00000459475.1 ENST00000459475.1_4_72_+ 4–72 19568.00 63.47 33.96 84.78 SNORD126-201 snoRNA heart (Tissue)
ENST00000459577.1 ENST00000459577.1_12_91_+ 12–91 23215.00 92.44 40.29 96.56 SNORD124-201 snoRNA heart (Tissue)
ENST00000461448.6 ENST00000461448.6_522_587_+ 522–587 8.00 0.89 0.01 100.0 SNHG12-201 retained intron heart (Tissue)
ENST00000467105.1 ENST00000467105.1_581_668_+ 581–668 6615.00 44.40 11.48 94.37 RPL3-212 retained intron heart (Tissue)
ENST00000467105.1 ENST00000467105.1_582_665_+ 582–665 4130.00 27.72 7.17 100.0 RPL3-212 retained intron heart (Tissue)
ENST00000469129.1 ENST00000469129.1_822_842_+ 822–842 84986.00 98.00 147.48 100.0 SMC1A-204 retained intron heart (Tissue)
ENST00000471759.5 ENST00000471759.5_372_449_+ 372–449 65584.00 90.82 113.81 98.85 RABGGTB-208 protein coding CDS not defined heart (Tissue)
ENST00000481456.1 ENST00000481456.1_862_898_+ 862–898 6842.00 28.58 11.87 100.0 DDX39B-219 retained intron heart (Tissue)
ENST00000481456.1 ENST00000481456.1_825_898_+ 825–898 7967.00 33.28 13.83 82.3 DDX39B-219 retained intron heart (Tissue)
ENST00000481456.1 ENST00000481456.1_847_901_+ 847–901 1583.00 6.61 2.75 100.0 DDX39B-219 retained intron heart (Tissue)
ENST00000484599.1 ENST00000484599.1_580_645_+ 580–645 8098.00 75.99 14.05 100.0 RPS8-206 protein coding CDS not defined heart (Tissue)
ENST00000484610.5 ENST00000484610.5_361_433_+ 361–433 65322.00 90.68 113.36 98.84 RPL13-207 retained intron heart (Tissue)
ENST00000484610.5 ENST00000484610.5_392_433_+ 392–433 2785.00 3.87 4.83 100.0 RPL13-207 retained intron heart (Tissue)
ENST00000485101.5 ENST00000485101.5_343_400_+ 343–400 3201.00 0.26 5.55 81.97 EIF4A2-219 retained intron heart (Tissue)
ENST00000485101.5 ENST00000485101.5_343_393_+ 343–393 3810.00 0.31 6.61 45.92 EIF4A2-219 retained intron heart (Tissue)
ENST00000485101.5 ENST00000485101.5_348_405_+ 348–405 10808.00 0.89 18.76 62.37 EIF4A2-219 retained intron heart (Tissue)