ENCFF001RMK

Library Details

Organism: Homo Sapiens
Biosample: heart (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFT
Description: Part of ENCODE experiment ENCSR000AFT. The libraries contained in this experiment come from human fetal heart tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000410433.1 ENST00000410433.1_7_84_+ 7–84 106435.00 93.41 184.71 98.87 SNORD12B-201 snoRNA heart (Tissue)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 2457.00 2.16 4.26 100.0 SNORD12B-201 snoRNA heart (Tissue)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 398.00 13.20 0.69 100.0 Y_RNA.609-201 misc RNA heart (Tissue)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 235.00 35.71 0.41 100.0 Y_RNA.612-201 misc RNA heart (Tissue)
ENST00000411292.1 ENST00000411292.1_6_82_+ 6–82 1505.00 1.73 2.61 100.0 SNORD71-201 snoRNA heart (Tissue)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 1431.00 1.65 2.48 100.0 SNORD71-201 snoRNA heart (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 79914.00 92.00 138.68 99.02 SNORD71-201 snoRNA heart (Tissue)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 5175.00 23.51 8.98 72.66 MIR194-2HG-201 lncRNA heart (Tissue)
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 15736.00 71.49 27.31 89.15 MIR194-2HG-201 lncRNA heart (Tissue)
ENST00000415386.2 ENST00000415386.2_302_374_+ 302–374 5.00 0.06 0.01 100.0 LINC01783-201 lncRNA heart (Tissue)
ENST00000415804.2 ENST00000415804.2_467_487_+ 467–487 864.00 98.52 1.50 100.0 RPS7P15-201 processed pseudogene heart (Tissue)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 410.00 2.91 0.71 100.0 SNORD62B-201 snoRNA heart (Tissue)
ENST00000426867.1 ENST00000426867.1_58_86_+ 58–86 57.00 0.40 0.10 100.0 SNORD62B-201 snoRNA heart (Tissue)
ENST00000426867.1 ENST00000426867.1_72_86_+ 72–86 1595.00 11.33 2.77 100.0 SNORD62B-201 snoRNA heart (Tissue)
ENST00000426867.1 ENST00000426867.1_1_35_+ 1–35 8131.00 57.76 14.11 96.28 SNORD62B-201 snoRNA heart (Tissue)
ENST00000426867.1 ENST00000426867.1_1_86_+ 1–86 739.00 5.25 1.28 100.0 SNORD62B-201 snoRNA heart (Tissue)
ENST00000432845.1 ENST00000432845.1_2382_2409_+ 2382–2409 48.00 81.36 0.08 100.0 MRPL32-203 nonsense mediated decay heart (Tissue)
ENST00000436739.2 ENST00000436739.2_403_416_+ 403–416 129.00 87.16 0.22 100.0 ENST00000436739 lncRNA heart (Tissue)
ENST00000437139.7 ENST00000437139.7_1225_1267_+ 1225–1267 1107.00 7.17 1.92 100.0 TMEM107-204 protein coding heart (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1267_+ 1182–1267 1514.00 9.81 2.63 100.0 TMEM107-204 protein coding heart (Tissue)
ENST00000437139.7 ENST00000437139.7_1209_1267_+ 1209–1267 1821.00 11.80 3.16 70.64 TMEM107-204 protein coding heart (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1225_+ 1182–1225 182.00 1.18 0.32 100.0 TMEM107-204 protein coding heart (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1238_+ 1182–1238 955.00 6.19 1.66 67.3 TMEM107-204 protein coding heart (Tissue)
ENST00000448136.6 ENST00000448136.6_1026_1098_+ 1026–1098 625.00 28.51 1.08 100.0 SNHG16-201 lncRNA heart (Tissue)
ENST00000448136.6 ENST00000448136.6_1027_1095_+ 1027–1095 1135.00 51.78 1.97 87.24 SNHG16-201 lncRNA heart (Tissue)