ENCFF001RMJ

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 72412.00 30.73 188.28 100.0 SNORD114-22-201 snoRNA skin of body (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 17454.00 81.04 45.38 100.0 SNORD6-201 snoRNA skin of body (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 1673.00 7.77 4.35 100.0 SNORD6-201 snoRNA skin of body (Tissue)
ENST00000365484.1 ENST00000365484.1_1_95_+ 1–95 869.00 11.04 2.26 100.0 RNY3-201 misc RNA skin of body (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 1025.00 0.69 2.67 100.0 SNORD82-201 snoRNA skin of body (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 9532.61 6.40 24.79 52.27 SNORD82-201 snoRNA skin of body (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 111232.00 74.70 289.21 97.82 SNORD82-201 snoRNA skin of body (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 361.00 0.24 0.94 100.0 SNORD82-201 snoRNA skin of body (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 4889.00 3.28 12.71 90.02 SNORD82-201 snoRNA skin of body (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 8486.83 5.70 22.07 46.54 SNORD82-201 snoRNA skin of body (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 382.00 0.26 0.99 100.0 SNORD82-201 snoRNA skin of body (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 27965.00 94.07 72.71 95.64 MIR146B-201 miRNA skin of body (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 761.00 51.80 1.98 100.0 SNHG20-201 lncRNA skin of body (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 220.00 19.64 0.57 100.0 ATP5MK-205 protein coding skin of body (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 198.00 17.68 0.51 100.0 ATP5MK-205 protein coding skin of body (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 37.00 21.89 0.10 100.0 LINC01556-201 lncRNA skin of body (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 109.00 46.19 0.28 100.0 ATAD3A-202 protein coding skin of body (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 6762.00 54.34 17.58 73.34 TMC5-202 protein coding skin of body (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 22.00 39.29 0.06 100.0 ZMYM2-203 protein coding skin of body (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 644.00 8.04 1.67 100.0 RNVU1-7-201 snRNA skin of body (Tissue)
ENST00000383884.1 ENST00000383884.1_1_75_+ 1–75 760.00 19.75 1.98 100.0 SNORD24-201 snoRNA skin of body (Tissue)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 3.00 2.33 0.01 100.0 Y_RNA.389-201 misc RNA skin of body (Tissue)
ENST00000384027.1 ENST00000384027.1_3_70_+ 3–70 39832.00 79.65 103.57 97.43 SNORD101-201 snoRNA skin of body (Tissue)
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 732.00 1.46 1.90 100.0 SNORD101-201 snoRNA skin of body (Tissue)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 368.00 0.74 0.96 100.0 SNORD101-201 snoRNA skin of body (Tissue)