ENCFF001RMJ

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 10951.00 0.21 28.47 94.9 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 9817.00 0.19 25.53 66.86 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 5265.00 0.10 13.69 59.89 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 27142.00 51.12 70.57 83.21 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 3360.00 95.18 8.74 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 3003.00 46.91 7.81 82.52 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 1804.00 89.13 4.69 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 283326.00 76.22 736.68 91.9 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 216.00 0.06 0.56 27.41 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 572.00 0.15 1.49 72.59 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 1621.00 1.63 4.21 79.73 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 31871.40 31.95 82.87 39.78 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 58806.96 58.96 152.90 67.57 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 993047.00 93.53 2582.02 97.44 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 473.00 7.75 1.23 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 12359.00 44.06 32.13 83.34 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 109.00 0.00 0.28 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 315.00 0.04 0.82 68.63 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 483.00 22.48 1.26 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 145.00 6.60 0.38 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 3430312.00 99.23 8919.16 99.93 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 11139.00 17.21 28.96 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 29010.00 44.82 75.43 86.33 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 3121.00 57.04 8.11 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA skin of body (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 2142.00 72.68 5.57 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA skin of body (Tissue)