ENCFF001RMJ

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 475.00 0.04 1.24 100.0 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 389.00 0.03 1.01 100.0 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 10380.00 0.81 26.99 100.0 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 73.00 0.01 0.19 100.0 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 2332.00 0.18 6.06 100.0 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 30807.00 2.39 80.10 69.15 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_2507_2560_+ 2507–2560 1678.00 0.13 4.36 100.0 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 193372.00 15.01 502.79 96.25 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 2911.00 0.23 7.57 100.0 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 602.00 0.05 1.57 100.0 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_517_596_+ 517–596 4.00 0.00 0.01 100.0 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 89636.00 6.96 233.06 100.0 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 2667.00 0.21 6.93 79.99 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 574.59 0.04 1.49 54.05 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 864.00 0.07 2.25 100.0 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 2789.00 0.22 7.25 68.49 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 1892.00 0.15 4.92 100.0 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 1417.00 0.11 3.68 100.0 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 1067.00 0.08 2.77 100.0 SNHG1-248 lncRNA skin of body (Tissue)
ENST00000668419.1 ENST00000668419.1_3471_3561_+ 3471–3561 26139.00 40.58 67.96 100.0 SNHG14-315 lncRNA skin of body (Tissue)
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 13774.00 21.38 35.81 88.61 SNHG14-315 lncRNA skin of body (Tissue)
ENST00000668419.1 ENST00000668419.1_2_92_+ 2–92 15148.00 23.51 39.39 85.03 SNHG14-315 lncRNA skin of body (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 669.00 0.55 1.74 100.0 SNHG5-273 lncRNA skin of body (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 33882.08 27.69 88.10 42.3 SNHG5-273 lncRNA skin of body (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 57.00 0.05 0.15 100.0 SNHG5-273 lncRNA skin of body (Tissue)