ENCFF001RMJ

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 9575.00 0.91 24.90 100.0 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_1641_1722_+ 1641–1722 3.00 0.00 0.01 100.0 GAS5-230 retained intron skin of body (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1118_+ 1048–1118 167.00 0.02 0.43 100.0 GAS5-230 retained intron skin of body (Tissue)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 879.00 22.22 2.29 100.0 FTX-219 lncRNA skin of body (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 1271.00 32.13 3.30 81.42 FTX-219 lncRNA skin of body (Tissue)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 470.00 4.34 1.22 55.69 CTC1-214 protein coding skin of body (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 114.00 1.05 0.30 75.0 CTC1-214 protein coding skin of body (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 2648.00 24.44 6.89 67.53 CTC1-214 protein coding skin of body (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 374.00 3.45 0.97 44.31 CTC1-214 protein coding skin of body (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 1949.00 17.99 5.07 82.69 CTC1-214 protein coding skin of body (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 852.00 7.86 2.22 100.0 CTC1-214 protein coding skin of body (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 1220.00 11.26 3.17 100.0 CTC1-214 protein coding skin of body (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 160.00 1.48 0.42 100.0 CTC1-214 protein coding skin of body (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 2487.00 1.96 6.47 75.41 ENST00000651540 lncRNA skin of body (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 2873.00 2.26 7.47 99.03 ENST00000651540 lncRNA skin of body (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 1414.00 1.11 3.68 100.0 ENST00000651540 lncRNA skin of body (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 7041.00 5.55 18.31 53.95 ENST00000651540 lncRNA skin of body (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 1088.00 0.86 2.83 100.0 ENST00000651540 lncRNA skin of body (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 932.00 0.73 2.42 100.0 ENST00000651540 lncRNA skin of body (Tissue)
ENST00000651540.1 ENST00000651540.1_6_79_+ 6–79 622.00 0.49 1.62 100.0 ENST00000651540 lncRNA skin of body (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 4698.00 3.70 12.22 100.0 ENST00000651540 lncRNA skin of body (Tissue)
ENST00000651540.1 ENST00000651540.1_6_88_+ 6–88 2304.00 1.82 5.99 100.0 ENST00000651540 lncRNA skin of body (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 18950.00 14.93 49.27 47.05 ENST00000651540 lncRNA skin of body (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 2470.00 1.95 6.42 100.0 ENST00000651540 lncRNA skin of body (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 51884.00 40.88 134.90 89.59 ENST00000651540 lncRNA skin of body (Tissue)