ENCFF001RMJ

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000595794.5 ENST00000595794.5_236_276_+ 236–276 44.00 0.01 0.11 100.0 C19orf48P-203 retained intron skin of body (Tissue)
ENST00000595794.5 ENST00000595794.5_230_318_+ 230–318 8.00 0.00 0.02 100.0 C19orf48P-203 retained intron skin of body (Tissue)
ENST00000597420.2 ENST00000597420.2_241_263_+ 241–263 29.00 69.05 0.08 100.0 ENST00000597420 lncRNA skin of body (Tissue)
ENST00000600027.5 ENST00000600027.5_434_519_+ 434–519 63.00 2.51 0.16 100.0 RPS11-206 retained intron skin of body (Tissue)
ENST00000600027.5 ENST00000600027.5_441_519_+ 441–519 1768.00 70.49 4.60 100.0 RPS11-206 retained intron skin of body (Tissue)
ENST00000602315.3 ENST00000602315.3_752_771_+ 752–771 92730.00 50.21 241.11 52.66 CARMN-209 lncRNA skin of body (Tissue)
ENST00000602478.2 ENST00000602478.2_671_758_+ 671–758 1493.00 27.12 3.88 100.0 ENST00000602478 lncRNA skin of body (Tissue)
ENST00000604535.1 ENST00000604535.1_1396_1410_+ 1396–1410 1.00 9.09 0.00 100.0 PPFIA1P1-201 processed pseudogene skin of body (Tissue)
ENST00000606412.1 ENST00000606412.1_4_67_+ 4–67 7881.00 41.64 20.49 100.0 SNORD114-21-201 snoRNA skin of body (Tissue)
ENST00000606412.1 ENST00000606412.1_35_67_+ 35–67 6044.00 31.93 15.72 100.0 SNORD114-21-201 snoRNA skin of body (Tissue)
ENST00000606510.1 ENST00000606510.1_2_82_+ 2–82 8.00 3.94 0.02 100.0 SNORD115-40-201 snoRNA skin of body (Tissue)
ENST00000606724.1 ENST00000606724.1_22_43_+ 22–43 56582.00 98.74 147.12 100.0 MIR98-201 miRNA skin of body (Tissue)
ENST00000607261.1 ENST00000607261.1_3_73_+ 3–73 93187.00 96.66 242.30 100.0 SNORD113-5-201 snoRNA skin of body (Tissue)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 4255.00 92.84 11.06 100.0 MIR15A-201 miRNA skin of body (Tissue)
ENST00000607441.3 ENST00000607441.3_43_63_+ 43–63 4782.00 86.16 12.43 100.0 MIR376C-201 miRNA skin of body (Tissue)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 1659.00 53.04 4.31 100.0 SNHG21-206 retained intron skin of body (Tissue)
ENST00000607707.1 ENST00000607707.1_5_84_+ 5–84 116.00 13.68 0.30 100.0 SNORD11B-201 snoRNA skin of body (Tissue)
ENST00000608459.2 ENST00000608459.2_31_111_+ 31–111 1448.00 61.33 3.76 100.0 SNORD91B-201 snoRNA skin of body (Tissue)
ENST00000608502.2 ENST00000608502.2_858_879_+ 858–879 2.00 12.50 0.01 100.0 MIR219A2HG-201 lncRNA skin of body (Tissue)
ENST00000609620.2 ENST00000609620.2_7_86_+ 7–86 13223.00 58.84 34.38 71.14 SNORD91A-201 snoRNA skin of body (Tissue)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 133962.00 47.81 348.31 97.71 MIR486-1-201 miRNA skin of body (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 20923.00 19.82 54.40 80.03 NOP56-219 retained intron skin of body (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 1752.00 1.66 4.56 100.0 NOP56-219 retained intron skin of body (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 821.00 0.78 2.13 100.0 NOP56-219 retained intron skin of body (Tissue)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 58381.00 55.31 151.80 82.92 NOP56-219 retained intron skin of body (Tissue)