ENCFF001RMJ

Library Details

Organism: Homo Sapiens
Biosample: skin of body (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGA
Description: Part of ENCODE experiment ENCSR000AGA. The libraries contained in this experiment come from human fetal skin tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 5402.00 1.24 14.05 100.0 MT-TE-201 Mt tRNA skin of body (Tissue)
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 2865.00 62.20 7.45 100.0 MIR196A1-201 miRNA skin of body (Tissue)
ENST00000389680.2 ENST00000389680.2_2_90_+ 2–90 766.00 4.23 1.99 100.0 MT-RNR1-201 Mt rRNA skin of body (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 426.00 2.35 1.11 100.0 MT-RNR1-201 Mt rRNA skin of body (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 4050.00 86.98 10.53 100.0 MIR454-201 miRNA skin of body (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 127.00 18.30 0.33 100.0 MIR501-201 miRNA skin of body (Tissue)
ENST00000390225.1 ENST00000390225.1_30_51_+ 30–51 3990.00 89.76 10.37 100.0 MIR769-201 miRNA skin of body (Tissue)
ENST00000390689.3 ENST00000390689.3_37_51_+ 37–51 40.00 54.79 0.10 100.0 KRTAP19-1-201 protein coding skin of body (Tissue)
ENST00000390708.1 ENST00000390708.1_11_33_+ 11–33 2639.00 59.22 6.86 100.0 MIR708-201 miRNA skin of body (Tissue)
ENST00000390725.1 ENST00000390725.1_44_66_+ 44–66 468.00 88.47 1.22 100.0 MIR509-3-201 miRNA skin of body (Tissue)
ENST00000390751.3 ENST00000390751.3_47_68_+ 47–68 901.00 59.16 2.34 100.0 MIR543-201 miRNA skin of body (Tissue)
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 90.00 96.77 0.23 100.0 MIR301B-201 miRNA skin of body (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 2229.00 50.67 5.80 77.58 RNU1-82P-201 snRNA skin of body (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 3373.00 16.66 8.77 76.17 SNORD66-201 snoRNA skin of body (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 535.00 2.64 1.39 100.0 SNORD66-201 snoRNA skin of body (Tissue)
ENST00000390856.1 ENST00000390856.1_1_75_+ 1–75 8779.00 43.35 22.83 100.0 SNORD66-201 snoRNA skin of body (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 36.00 0.18 0.09 100.0 SNORD66-201 snoRNA skin of body (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 337.00 63.83 0.88 100.0 U3.17-201 snoRNA skin of body (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 7090.00 64.92 18.43 100.0 SNORD17-201 snoRNA skin of body (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 52.00 32.30 0.14 100.0 SNORD72-201 snoRNA skin of body (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 2825.00 77.55 7.35 100.0 SNORD70B-201 snoRNA skin of body (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 7486.00 58.57 19.46 87.69 RNY4P18-201 misc RNA skin of body (Tissue)
ENST00000391145.1 ENST00000391145.1_18_97_+ 18–97 55020.00 93.74 143.06 100.0 SNORD90-201 snoRNA skin of body (Tissue)
ENST00000391145.1 ENST00000391145.1_18_100_+ 18–100 605.00 1.03 1.57 14.48 SNORD90-201 snoRNA skin of body (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 1857.00 1.24 4.83 100.0 SNORD69-201 snoRNA skin of body (Tissue)