ENCFF001RMI

Library Details

Organism: Homo Sapiens
Biosample: skeletal muscle tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFZ
Description: Part of ENCODE experiment ENCSR000AFZ. The libraries contained in this experiment come from human fetal skeletal muscle tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 394.00 18.11 1.71 53.97 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 733.00 85.43 3.18 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 232.00 25.55 1.01 81.69 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 166.00 90.71 0.72 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 434.00 0.73 1.88 84.27 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 81.00 0.14 0.35 15.73 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 33930.00 57.07 147.15 83.87 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 2819.03 24.20 12.23 36.74 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 414.00 3.55 1.80 67.98 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 6509.83 55.89 28.23 70.91 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 94497.00 90.03 409.82 95.96 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 76.00 1.57 0.33 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 1945.00 31.20 8.44 90.97 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 38.00 0.04 0.16 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 405.00 0.21 1.76 76.85 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 67.00 14.50 0.29 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 177.00 7.44 0.77 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 84397.00 93.47 366.02 99.82 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 100.00 1.58 0.43 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 1076.00 17.05 4.67 74.93 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 124.00 15.84 0.54 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 35.00 2.31 0.15 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 86.00 2.97 0.37 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 18382.00 92.21 79.72 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA skeletal muscle tissue (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 793.00 88.90 3.44 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA skeletal muscle tissue (Tissue)