ENCFF001RMI

Library Details

Organism: Homo Sapiens
Biosample: skeletal muscle tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFZ
Description: Part of ENCODE experiment ENCSR000AFZ. The libraries contained in this experiment come from human fetal skeletal muscle tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000710424.1 ENST00000710424.1_2162_2185_+ 2162–2185 88157.22 43.51 382.33 46.77 MIR17HG-214 lncRNA skeletal muscle tissue (Tissue)
ENST00000710424.1 ENST00000710424.1_2046_2067_+ 2046–2067 5840.00 2.88 25.33 100.0 MIR17HG-214 lncRNA skeletal muscle tissue (Tissue)
ENST00000710424.1 ENST00000710424.1_2069_2124_+ 2069–2124 80.00 0.04 0.35 100.0 MIR17HG-214 lncRNA skeletal muscle tissue (Tissue)
ENST00000710424.1 ENST00000710424.1_1873_1895_+ 1873–1895 640.00 0.32 2.78 100.0 MIR17HG-214 lncRNA skeletal muscle tissue (Tissue)
ENST00000710424.1 ENST00000710424.1_1419_1441_+ 1419–1441 595.00 0.29 2.58 100.0 MIR17HG-214 lncRNA skeletal muscle tissue (Tissue)
ENST00000718227.1 ENST00000718227.1_356_384_+ 356–384 3192.00 1.87 13.84 100.0 SNHG32-223 lncRNA skeletal muscle tissue (Tissue)
ENST00000718227.1 ENST00000718227.1_387_419_+ 387–419 1336.00 0.78 5.79 100.0 SNHG32-223 lncRNA skeletal muscle tissue (Tissue)
ENST00000718227.1 ENST00000718227.1_359_419_+ 359–419 252.00 0.15 1.09 100.0 SNHG32-223 lncRNA skeletal muscle tissue (Tissue)
ENST00000718227.1 ENST00000718227.1_352_421_+ 352–421 702.00 0.41 3.04 44.63 SNHG32-223 lncRNA skeletal muscle tissue (Tissue)
ENST00000718227.1 ENST00000718227.1_356_419_+ 356–419 162168.00 95.00 703.31 100.0 SNHG32-223 lncRNA skeletal muscle tissue (Tissue)
ENST00000718231.1 ENST00000718231.1_1950_2016_+ 1950–2016 34493.00 77.44 149.59 98.75 SNHG32-227 lncRNA skeletal muscle tissue (Tissue)
ENST00000718231.1 ENST00000718231.1_1988_2016_+ 1988–2016 4720.00 10.60 20.47 100.0 SNHG32-227 lncRNA skeletal muscle tissue (Tissue)
ENST00000718231.1 ENST00000718231.1_1955_2016_+ 1955–2016 782.00 1.76 3.39 100.0 SNHG32-227 lncRNA skeletal muscle tissue (Tissue)
ENST00000718231.1 ENST00000718231.1_1964_2016_+ 1964–2016 993.00 2.23 4.31 100.0 SNHG32-227 lncRNA skeletal muscle tissue (Tissue)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 254.00 80.63 1.10 100.0 B4GALT1-203 nonsense mediated decay skeletal muscle tissue (Tissue)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 1750.00 5.33 7.59 100.0 ENST00000722183 lncRNA skeletal muscle tissue (Tissue)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 18641.00 56.74 80.84 91.0 ENST00000722183 lncRNA skeletal muscle tissue (Tissue)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 2369.00 7.21 10.27 100.0 ENST00000722183 lncRNA skeletal muscle tissue (Tissue)
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 306.00 90.00 1.33 100.0 MIR34BHG-202 lncRNA skeletal muscle tissue (Tissue)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 1669.00 80.12 7.24 86.12 THBS3-AS1-228 lncRNA skeletal muscle tissue (Tissue)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 12.00 66.67 0.05 100.0 MIR200CHG-202 lncRNA skeletal muscle tissue (Tissue)
ENST00000732834.1 ENST00000732834.1_1719_1741_+ 1719–1741 1.00 5.56 0.00 100.0 MIR200CHG-202 lncRNA skeletal muscle tissue (Tissue)
ENST00000738116.1 ENST00000738116.1_64_138_+ 64–138 123.00 4.29 0.53 100.0 SNHG16-266 lncRNA skeletal muscle tissue (Tissue)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 716.00 24.99 3.11 100.0 SNHG16-266 lncRNA skeletal muscle tissue (Tissue)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 321.00 11.20 1.39 100.0 SNHG16-266 lncRNA skeletal muscle tissue (Tissue)