ENCFF001RMI

Library Details

Organism: Homo Sapiens
Biosample: skeletal muscle tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFZ
Description: Part of ENCODE experiment ENCSR000AFZ. The libraries contained in this experiment come from human fetal skeletal muscle tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000686899.3 ENST00000686899.3_568_647_+ 568–647 22516.54 54.90 97.65 67.43 SNHG19-202 lncRNA skeletal muscle tissue (Tissue)
ENST00000686899.3 ENST00000686899.3_562_648_+ 562–648 1.86 0.00 0.01 62.16 SNHG19-202 lncRNA skeletal muscle tissue (Tissue)
ENST00000686899.3 ENST00000686899.3_562_650_+ 562–650 1.44 0.00 0.01 72.05 SNHG19-202 lncRNA skeletal muscle tissue (Tissue)
ENST00000688264.3 ENST00000688264.3_548_571_+ 548–571 541.00 17.38 2.35 100.0 MIR222HG-206 lncRNA skeletal muscle tissue (Tissue)
ENST00000688264.3 ENST00000688264.3_1402_1424_+ 1402–1424 1796.00 57.69 7.79 79.19 MIR222HG-206 lncRNA skeletal muscle tissue (Tissue)
ENST00000688264.3 ENST00000688264.3_1362_1387_+ 1362–1387 16.00 0.51 0.07 100.0 MIR222HG-206 lncRNA skeletal muscle tissue (Tissue)
ENST00000688371.3 ENST00000688371.3_493_514_+ 493–514 2.00 13.33 0.01 100.0 MIR302CHG-205 lncRNA skeletal muscle tissue (Tissue)
ENST00000688371.3 ENST00000688371.3_673_694_+ 673–694 3.00 20.00 0.01 100.0 MIR302CHG-205 lncRNA skeletal muscle tissue (Tissue)
ENST00000688371.3 ENST00000688371.3_458_478_+ 458–478 7.00 46.67 0.03 100.0 MIR302CHG-205 lncRNA skeletal muscle tissue (Tissue)
ENST00000688371.3 ENST00000688371.3_458_490_+ 458–490 1.00 6.67 0.00 100.0 MIR302CHG-205 lncRNA skeletal muscle tissue (Tissue)
ENST00000688371.3 ENST00000688371.3_458_481_+ 458–481 1.00 6.67 0.00 20.0 MIR302CHG-205 lncRNA skeletal muscle tissue (Tissue)
ENST00000697734.1 ENST00000697734.1_1838_1871_+ 1838–1871 5.00 5.38 0.02 100.0 RPSA-216 retained intron skeletal muscle tissue (Tissue)
ENST00000697879.1 ENST00000697879.1_547_564_+ 547–564 1281.00 1.66 5.56 82.17 MIR99AHG-370 lncRNA skeletal muscle tissue (Tissue)
ENST00000697879.1 ENST00000697879.1_547_568_+ 547–568 74163.00 95.83 321.64 99.09 MIR99AHG-370 lncRNA skeletal muscle tissue (Tissue)
ENST00000699245.1 ENST00000699245.1_739_776_+ 739–776 522.00 96.13 2.26 100.0 HPS4-237 retained intron skeletal muscle tissue (Tissue)
ENST00000699458.1 ENST00000699458.1_1475_1492_+ 1475–1492 5956.00 87.14 25.83 100.0 MEG8-253 lncRNA skeletal muscle tissue (Tissue)
ENST00000699460.1 ENST00000699460.1_1623_1644_+ 1623–1644 5708.00 41.69 24.76 100.0 MEG9-206 lncRNA skeletal muscle tissue (Tissue)
ENST00000699460.1 ENST00000699460.1_1872_1893_+ 1872–1893 1551.00 11.33 6.73 100.0 MEG9-206 lncRNA skeletal muscle tissue (Tissue)
ENST00000699460.1 ENST00000699460.1_2148_2169_+ 2148–2169 954.00 6.97 4.14 100.0 MEG9-206 lncRNA skeletal muscle tissue (Tissue)
ENST00000703637.1 ENST00000703637.1_459_481_+ 459–481 192.00 12.70 0.83 100.0 DNAJC5-203 nonsense mediated decay skeletal muscle tissue (Tissue)
ENST00000707189.1 ENST00000707189.1_1316_1333_+ 1316–1333 677.00 19.87 2.94 100.0 ENST00000707189 TEC skeletal muscle tissue (Tissue)
ENST00000710424.1 ENST00000710424.1_1932_2007_+ 1932–2007 5.00 0.00 0.02 100.0 MIR17HG-214 lncRNA skeletal muscle tissue (Tissue)
ENST00000710424.1 ENST00000710424.1_2162_2183_+ 2162–2183 109044.58 53.82 472.92 58.18 MIR17HG-214 lncRNA skeletal muscle tissue (Tissue)
ENST00000710424.1 ENST00000710424.1_1557_1579_+ 1557–1579 43.00 0.02 0.19 100.0 MIR17HG-214 lncRNA skeletal muscle tissue (Tissue)
ENST00000710424.1 ENST00000710424.1_1740_1762_+ 1740–1762 718.00 0.35 3.11 100.0 MIR17HG-214 lncRNA skeletal muscle tissue (Tissue)