ENCFF001RMI

Library Details

Organism: Homo Sapiens
Biosample: skeletal muscle tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFZ
Description: Part of ENCODE experiment ENCSR000AFZ. The libraries contained in this experiment come from human fetal skeletal muscle tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 38.00 0.19 0.16 100.0 SNHG5-273 lncRNA skeletal muscle tissue (Tissue)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 1836.00 9.13 7.96 100.0 SNHG5-273 lncRNA skeletal muscle tissue (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 4.00 0.02 0.02 100.0 SNHG5-273 lncRNA skeletal muscle tissue (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1361_+ 1278–1361 658.00 3.27 2.85 96.34 SNHG5-273 lncRNA skeletal muscle tissue (Tissue)
ENST00000669673.1 ENST00000669673.1_3794_3884_+ 3794–3884 423.00 6.76 1.83 62.57 SNHG14-323 lncRNA skeletal muscle tissue (Tissue)
ENST00000670680.1 ENST00000670680.1_2_69_+ 2–69 4398312.00 94.75 19075.04 98.72 MEG8-251 lncRNA skeletal muscle tissue (Tissue)
ENST00000670680.1 ENST00000670680.1_34_69_+ 34–69 11565.00 0.25 50.16 47.02 MEG8-251 lncRNA skeletal muscle tissue (Tissue)
ENST00000670680.1 ENST00000670680.1_36_69_+ 36–69 17147.00 0.37 74.36 66.44 MEG8-251 lncRNA skeletal muscle tissue (Tissue)
ENST00000670680.1 ENST00000670680.1_1539_1602_+ 1539–1602 67645.00 1.46 293.37 88.5 MEG8-251 lncRNA skeletal muscle tissue (Tissue)
ENST00000670680.1 ENST00000670680.1_10_70_+ 10–70 12631.00 0.27 54.78 100.0 MEG8-251 lncRNA skeletal muscle tissue (Tissue)
ENST00000670697.1 ENST00000670697.1_226_313_+ 226–313 1.00 0.00 0.00 100.0 SNHG14-336 lncRNA skeletal muscle tissue (Tissue)
ENST00000670697.1 ENST00000670697.1_233_310_+ 233–310 12220.00 60.41 53.00 85.69 SNHG14-336 lncRNA skeletal muscle tissue (Tissue)
ENST00000670697.1 ENST00000670697.1_232_313_+ 232–313 7095.00 35.07 30.77 61.18 SNHG14-336 lncRNA skeletal muscle tissue (Tissue)
ENST00000671491.1 ENST00000671491.1_1778_1868_+ 1778–1868 3840.00 64.58 16.65 94.7 SNHG14-341 lncRNA skeletal muscle tissue (Tissue)
ENST00000676514.1 ENST00000676514.1_1978_2054_+ 1978–2054 45.00 6.40 0.20 100.0 NCL-211 retained intron skeletal muscle tissue (Tissue)
ENST00000679646.1 ENST00000679646.1_899_921_+ 899–921 269.00 20.69 1.17 100.0 FMN2-209 protein coding CDS not defined skeletal muscle tissue (Tissue)
ENST00000685142.3 ENST00000685142.3_1449_1480_+ 1449–1480 1.00 0.01 0.00 100.0 LINC02739-203 lncRNA skeletal muscle tissue (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1423_+ 1409–1423 218.00 1.43 0.95 38.93 LINC02739-203 lncRNA skeletal muscle tissue (Tissue)
ENST00000685142.3 ENST00000685142.3_1421_1436_+ 1421–1436 2400.00 15.76 10.41 100.0 LINC02739-203 lncRNA skeletal muscle tissue (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1440_+ 1409–1440 5570.00 36.58 24.16 100.0 LINC02739-203 lncRNA skeletal muscle tissue (Tissue)
ENST00000685142.3 ENST00000685142.3_1405_1444_+ 1405–1444 659.00 4.33 2.86 100.0 LINC02739-203 lncRNA skeletal muscle tissue (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1421_+ 1409–1421 342.00 2.25 1.48 61.07 LINC02739-203 lncRNA skeletal muscle tissue (Tissue)
ENST00000685227.3 ENST00000685227.3_1036_1055_+ 1036–1055 48.00 92.31 0.21 100.0 MIR124-1HG-216 lncRNA skeletal muscle tissue (Tissue)
ENST00000685307.3 ENST00000685307.3_1198_1226_+ 1198–1226 237.00 24.59 1.03 100.0 SNHG10-212 lncRNA skeletal muscle tissue (Tissue)
ENST00000686899.3 ENST00000686899.3_568_649_+ 568–649 16719.92 40.77 72.51 42.5 SNHG19-202 lncRNA skeletal muscle tissue (Tissue)