ENCFF001RMI

Library Details

Organism: Homo Sapiens
Biosample: skeletal muscle tissue (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFZ
Description: Part of ENCODE experiment ENCSR000AFZ. The libraries contained in this experiment come from human fetal skeletal muscle tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000595794.5 ENST00000595794.5_236_276_+ 236–276 56.00 0.01 0.24 100.0 C19orf48P-203 retained intron skeletal muscle tissue (Tissue)
ENST00000595794.5 ENST00000595794.5_230_318_+ 230–318 16.00 0.00 0.07 100.0 C19orf48P-203 retained intron skeletal muscle tissue (Tissue)
ENST00000597420.2 ENST00000597420.2_241_263_+ 241–263 89.00 83.18 0.39 100.0 ENST00000597420 lncRNA skeletal muscle tissue (Tissue)
ENST00000600027.5 ENST00000600027.5_434_519_+ 434–519 46.00 2.79 0.20 100.0 RPS11-206 retained intron skeletal muscle tissue (Tissue)
ENST00000600027.5 ENST00000600027.5_441_519_+ 441–519 1439.00 87.42 6.24 100.0 RPS11-206 retained intron skeletal muscle tissue (Tissue)
ENST00000602315.3 ENST00000602315.3_752_771_+ 752–771 59118.00 51.77 256.39 54.4 CARMN-209 lncRNA skeletal muscle tissue (Tissue)
ENST00000602478.2 ENST00000602478.2_671_758_+ 671–758 603.00 30.13 2.62 100.0 ENST00000602478 lncRNA skeletal muscle tissue (Tissue)
ENST00000604535.1 ENST00000604535.1_1396_1410_+ 1396–1410 3.00 27.27 0.01 100.0 PPFIA1P1-201 processed pseudogene skeletal muscle tissue (Tissue)
ENST00000606412.1 ENST00000606412.1_4_67_+ 4–67 37806.00 58.29 163.96 100.0 SNORD114-21-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000606412.1 ENST00000606412.1_35_67_+ 35–67 12465.00 19.22 54.06 100.0 SNORD114-21-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000606510.1 ENST00000606510.1_2_82_+ 2–82 265.00 28.25 1.15 100.0 SNORD115-40-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000606724.1 ENST00000606724.1_22_43_+ 22–43 27364.00 98.84 118.67 100.0 MIR98-201 miRNA skeletal muscle tissue (Tissue)
ENST00000607261.1 ENST00000607261.1_3_73_+ 3–73 428835.00 96.78 1859.81 100.0 SNORD113-5-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 2080.00 94.80 9.02 100.0 MIR15A-201 miRNA skeletal muscle tissue (Tissue)
ENST00000607441.3 ENST00000607441.3_43_63_+ 43–63 7984.00 87.77 34.63 100.0 MIR376C-201 miRNA skeletal muscle tissue (Tissue)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 2611.00 59.44 11.32 100.0 SNHG21-206 retained intron skeletal muscle tissue (Tissue)
ENST00000607707.1 ENST00000607707.1_5_84_+ 5–84 70.00 16.02 0.30 100.0 SNORD11B-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000608459.2 ENST00000608459.2_31_111_+ 31–111 329.00 32.29 1.43 100.0 SNORD91B-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000609620.2 ENST00000609620.2_7_86_+ 7–86 11841.00 60.59 51.35 73.46 SNORD91A-201 snoRNA skeletal muscle tissue (Tissue)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 120408.00 47.87 522.20 98.34 MIR486-1-201 miRNA skeletal muscle tissue (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 5120.00 8.12 22.20 75.18 NOP56-219 retained intron skeletal muscle tissue (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 917.00 1.45 3.98 100.0 NOP56-219 retained intron skeletal muscle tissue (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 2488.00 3.95 10.79 100.0 NOP56-219 retained intron skeletal muscle tissue (Tissue)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 39082.00 62.01 169.49 78.64 NOP56-219 retained intron skeletal muscle tissue (Tissue)
ENST00000612463.1 ENST00000612463.1_1_83_+ 1–83 464.00 11.22 2.01 45.67 RNA5-8SN2-201 rRNA skeletal muscle tissue (Tissue)