ENCFF001RMH

Library Details

Organism: Homo Sapiens
Biosample: lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFW
Description: Part of ENCODE experiment ENCSR000AFW. The libraries contained in this experiment come from human fetal lung tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 250.00 0.02 0.57 48.83 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 837.00 7.37 1.90 18.34 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 4642.00 98.85 10.53 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 585.00 38.29 1.33 95.28 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 981.00 95.80 2.22 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 396.00 0.71 0.90 89.8 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 45.00 0.08 0.10 10.2 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 19605.00 35.28 44.46 41.84 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 17468.96 58.66 39.62 64.55 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 942.00 3.16 2.14 94.96 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 8978.21 30.15 20.36 37.64 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 167192.00 97.85 379.15 99.47 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 205.00 14.88 0.46 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 1482.00 29.81 3.36 71.05 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 35.00 0.01 0.08 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 66.00 0.01 0.15 54.55 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 2340.00 87.28 5.31 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 71.00 11.38 0.16 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 543647.00 98.53 1232.87 99.84 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 1172.00 2.39 2.66 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 42142.00 86.06 95.57 96.12 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 413.00 52.28 0.94 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 7704.00 95.59 17.47 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 536.00 20.44 1.22 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 124980.00 98.51 283.43 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA lung (Tissue)