ENCFF001RMH

Library Details

Organism: Homo Sapiens
Biosample: lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFW
Description: Part of ENCODE experiment ENCSR000AFW. The libraries contained in this experiment come from human fetal lung tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 6.00 0.13 0.01 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 4.00 0.00 0.01 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 737.00 0.10 1.67 28.67 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 306.00 24.84 0.69 71.83 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 250.00 20.29 0.57 44.96 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 7.00 0.34 0.02 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 358480.00 59.97 812.95 92.34 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 341.00 0.06 0.77 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 52.00 6.40 0.12 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 23.00 1.07 0.05 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 5.00 0.16 0.01 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 204.00 0.65 0.46 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 18.00 0.06 0.04 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 22.00 0.07 0.05 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 86.00 0.27 0.20 94.51 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 75.00 0.24 0.17 68.81 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 53.00 0.17 0.12 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 1359.00 27.33 3.08 47.84 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 54.00 1.09 0.12 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 39.00 0.76 0.09 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 16.00 0.01 0.04 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 7.00 0.00 0.02 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 265.00 0.18 0.60 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 136580.00 94.93 309.73 98.06 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA lung (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 35.00 0.02 0.08 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA lung (Tissue)