ENCFF001RMH

Library Details

Organism: Homo Sapiens
Biosample: lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFW
Description: Part of ENCODE experiment ENCSR000AFW. The libraries contained in this experiment come from human fetal lung tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 8.00 10.26 0.02 100.0 Y_RNA.14-201 misc RNA lung (Tissue)
ENST00000362441.1 ENST00000362441.1_2_82_+ 2–82 600.00 37.06 1.36 100.0 SNORD115-34-201 snoRNA lung (Tissue)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 302.00 25.10 0.68 100.0 RNU5E-1-201 snRNA lung (Tissue)
ENST00000362545.1 ENST00000362545.1_1_85_+ 1–85 1.00 0.02 0.00 2.78 RNA5SP370-201 rRNA pseudogene lung (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 227.00 21.02 0.51 100.0 SNORA31-201 snoRNA lung (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 10.00 0.25 0.02 71.43 RNA5SP389-201 rRNA pseudogene lung (Tissue)
ENST00000362610.1 ENST00000362610.1_1_76_+ 1–76 13.00 0.32 0.03 100.0 RNA5SP389-201 rRNA pseudogene lung (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 78.00 1.95 0.18 96.3 RNA5SP389-201 rRNA pseudogene lung (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 10.00 0.25 0.02 100.0 RNA5SP389-201 rRNA pseudogene lung (Tissue)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 5371.00 11.32 12.18 100.0 RNU5A-1-201 snRNA lung (Tissue)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 2768.00 5.83 6.28 73.0 RNU5A-1-201 snRNA lung (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 4425.78 9.33 10.04 38.79 RNU5A-1-201 snRNA lung (Tissue)
ENST00000362698.1 ENST00000362698.1_29_116_+ 29–116 1558.00 3.28 3.53 63.49 RNU5A-1-201 snRNA lung (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 1772.00 3.74 4.02 80.4 RNU5A-1-201 snRNA lung (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 918.00 1.94 2.08 60.28 RNU5A-1-201 snRNA lung (Tissue)
ENST00000362698.1 ENST00000362698.1_40_116_+ 40–116 255.00 0.54 0.58 100.0 RNU5A-1-201 snRNA lung (Tissue)
ENST00000362698.1 ENST00000362698.1_36_116_+ 36–116 1469.00 3.10 3.33 63.43 RNU5A-1-201 snRNA lung (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 1112.00 2.34 2.52 38.4 RNU5A-1-201 snRNA lung (Tissue)
ENST00000362698.1 ENST00000362698.1_22_116_+ 22–116 3689.39 7.78 8.37 78.17 RNU5A-1-201 snRNA lung (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 964.00 2.03 2.19 51.94 RNU5A-1-201 snRNA lung (Tissue)
ENST00000362698.1 ENST00000362698.1_1_78_+ 1–78 253.00 0.53 0.57 100.0 RNU5A-1-201 snRNA lung (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 7564.03 15.94 17.15 68.77 RNU5A-1-201 snRNA lung (Tissue)
ENST00000362698.1 ENST00000362698.1_24_116_+ 24–116 347.32 0.73 0.79 6.97 RNU5A-1-201 snRNA lung (Tissue)
ENST00000362698.1 ENST00000362698.1_34_116_+ 34–116 1261.00 2.66 2.86 80.37 RNU5A-1-201 snRNA lung (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 6584.00 86.79 14.93 100.0 SNORD114-14-201 snoRNA lung (Tissue)