ENCFF001RMH

Library Details

Organism: Homo Sapiens
Biosample: lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFW
Description: Part of ENCODE experiment ENCSR000AFW. The libraries contained in this experiment come from human fetal lung tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 45443.00 78.78 103.05 92.79 MIR130A-201 miRNA lung (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 11605.00 20.12 26.32 36.03 MIR130A-201 miRNA lung (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 460048.00 98.27 1043.29 99.05 MIRLET7F2-201 miRNA lung (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 935.00 70.78 2.12 100.0 MIR652-201 miRNA lung (Tissue)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 57.00 86.36 0.13 100.0 MIR653-201 miRNA lung (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 5055.00 70.71 11.46 100.0 MIR140-201 miRNA lung (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 680.00 16.35 1.54 100.0 MIR106B-201 miRNA lung (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 1254.00 30.14 2.84 69.51 MIR106B-201 miRNA lung (Tissue)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 20696.00 20.11 46.93 93.87 SNORD83A-201 snoRNA lung (Tissue)
ENST00000386747.1 ENST00000386747.1_4_93_+ 4–93 78483.00 76.26 177.98 98.73 SNORD83A-201 snoRNA lung (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 2287.00 81.33 5.19 100.0 SNORD41-201 snoRNA lung (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 5.00 0.16 0.01 100.0 MT-TF-201 Mt tRNA lung (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 18.00 0.59 0.04 47.37 MT-TF-201 Mt tRNA lung (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 75.00 2.46 0.17 56.82 MT-TF-201 Mt tRNA lung (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 812.00 18.67 1.84 100.0 MT-TV-201 Mt tRNA lung (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 9.00 0.03 0.02 100.0 MT-RNR2-201 Mt rRNA lung (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 7830.00 24.10 17.76 88.41 MT-RNR2-201 Mt rRNA lung (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 1074.00 3.31 2.44 100.0 MT-RNR2-201 Mt rRNA lung (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 45.00 0.14 0.10 100.0 MT-RNR2-201 Mt rRNA lung (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 7050.00 21.69 15.99 83.82 MT-RNR2-201 Mt rRNA lung (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 607.00 1.87 1.38 100.0 MT-RNR2-201 Mt rRNA lung (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 3.00 0.01 0.01 100.0 MT-RNR2-201 Mt rRNA lung (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 3540.00 14.75 8.03 84.21 MT-TI-201 Mt tRNA lung (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 7466.00 31.10 16.93 100.0 MT-TI-201 Mt tRNA lung (Tissue)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 563.33 8.12 1.28 57.13 MT-TQ-201 Mt tRNA lung (Tissue)