ENCFF001RMG

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 349.00 0.91 1.48 100.0 SNORD82-201 snoRNA parietal lobe (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 2174.00 5.64 9.24 84.79 SNORD82-201 snoRNA parietal lobe (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 5245.55 13.62 22.30 58.73 SNORD82-201 snoRNA parietal lobe (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 1192.00 3.09 5.07 100.0 SNORD82-201 snoRNA parietal lobe (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 3936.72 10.22 16.73 44.07 SNORD82-201 snoRNA parietal lobe (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 352.00 0.91 1.50 100.0 SNORD82-201 snoRNA parietal lobe (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 2606.00 94.97 11.08 96.27 MIR146B-201 miRNA parietal lobe (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 6.00 12.77 0.03 100.0 SNHG20-201 lncRNA parietal lobe (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 140.00 5.90 0.60 100.0 ATP5MK-205 protein coding parietal lobe (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 1304.00 54.93 5.54 100.0 ATP5MK-205 protein coding parietal lobe (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 15.00 16.48 0.06 100.0 LINC01556-201 lncRNA parietal lobe (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 1374.00 84.92 5.84 100.0 ATAD3A-202 protein coding parietal lobe (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 1089.00 52.53 4.63 72.5 TMC5-202 protein coding parietal lobe (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 8.00 40.00 0.03 100.0 ZMYM2-203 protein coding parietal lobe (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 315.00 5.53 1.34 100.0 RNVU1-7-201 snRNA parietal lobe (Tissue)
ENST00000383884.1 ENST00000383884.1_1_75_+ 1–75 10877.00 77.00 46.23 100.0 SNORD24-201 snoRNA parietal lobe (Tissue)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 388.00 64.56 1.65 100.0 Y_RNA.389-201 misc RNA parietal lobe (Tissue)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 289.00 0.91 1.23 100.0 SNORD101-201 snoRNA parietal lobe (Tissue)
ENST00000384027.1 ENST00000384027.1_2_73_+ 2–73 4732.00 14.89 20.11 93.11 SNORD101-201 snoRNA parietal lobe (Tissue)
ENST00000384027.1 ENST00000384027.1_3_70_+ 3–70 24756.00 77.87 105.22 98.08 SNORD101-201 snoRNA parietal lobe (Tissue)
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 280.00 0.88 1.19 100.0 SNORD101-201 snoRNA parietal lobe (Tissue)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 45871.00 97.59 194.97 100.0 SNORD37-201 snoRNA parietal lobe (Tissue)
ENST00000384304.1 ENST00000384304.1_2_72_+ 2–72 52396.00 74.82 222.70 96.91 SNORD59A-201 snoRNA parietal lobe (Tissue)
ENST00000384360.1 ENST00000384360.1_1_47_+ 1–47 26.00 6.30 0.11 100.0 SNORA7B-201 snoRNA parietal lobe (Tissue)
ENST00000384390.1 ENST00000384390.1_1_87_+ 1–87 4378.00 85.69 18.61 100.0 SNORD14D-201 snoRNA parietal lobe (Tissue)