ENCFF001RMG

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000836993.1 ENST00000836993.1_387_463_+ 387–463 138971.00 94.11 590.68 99.65 ZFAS1-238 lncRNA parietal lobe (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 410.00 0.28 1.74 100.0 ZFAS1-238 lncRNA parietal lobe (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 1476.00 1.00 6.27 100.0 ZFAS1-238 lncRNA parietal lobe (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 616.00 0.42 2.62 100.0 ZFAS1-238 lncRNA parietal lobe (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 2773.00 4.63 11.79 100.0 ZFAS1-242 lncRNA parietal lobe (Tissue)
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 55387.00 92.47 235.42 100.0 ZFAS1-242 lncRNA parietal lobe (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 1308.00 35.26 5.56 100.0 ENST00000837997 lncRNA parietal lobe (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 1357.00 36.58 5.77 100.0 ENST00000837997 lncRNA parietal lobe (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 1620.00 72.61 6.89 82.32 ENST00000839036 lncRNA parietal lobe (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 6.00 6.98 0.03 100.0 ENST00000849527 lncRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 361.00 7.66 1.53 9.84 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 2.00 0.04 0.01 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 672.00 1.86 2.86 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 1582.00 65.83 6.72 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 19.00 0.79 0.08 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 13.00 5.99 0.06 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 74.00 6.13 0.31 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 126.00 40.38 0.54 75.0 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 543.00 1.50 2.31 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 255.00 21.74 1.08 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 101.00 6.67 0.43 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 1.00 0.07 0.00 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 4.00 0.26 0.02 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 921.00 46.99 3.91 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA parietal lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 914.00 2.94 3.88 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA parietal lobe (Tissue)