ENCFF001RMG

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000718231.1 ENST00000718231.1_1988_2016_+ 1988–2016 4478.00 7.87 19.03 100.0 SNHG32-227 lncRNA parietal lobe (Tissue)
ENST00000718231.1 ENST00000718231.1_1955_2016_+ 1955–2016 1093.00 1.92 4.65 100.0 SNHG32-227 lncRNA parietal lobe (Tissue)
ENST00000718231.1 ENST00000718231.1_1964_2016_+ 1964–2016 1448.00 2.55 6.15 100.0 SNHG32-227 lncRNA parietal lobe (Tissue)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 549.00 73.99 2.33 100.0 B4GALT1-203 nonsense mediated decay parietal lobe (Tissue)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 302.00 3.56 1.28 100.0 ENST00000722183 lncRNA parietal lobe (Tissue)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 3971.00 46.84 16.88 82.88 ENST00000722183 lncRNA parietal lobe (Tissue)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 732.00 8.64 3.11 100.0 ENST00000722183 lncRNA parietal lobe (Tissue)
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 537.00 92.27 2.28 100.0 MIR34BHG-202 lncRNA parietal lobe (Tissue)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 12408.00 79.48 52.74 84.04 THBS3-AS1-228 lncRNA parietal lobe (Tissue)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 8.00 66.67 0.03 100.0 MIR200CHG-202 lncRNA parietal lobe (Tissue)
ENST00000738116.1 ENST00000738116.1_64_138_+ 64–138 189.00 5.39 0.80 100.0 SNHG16-266 lncRNA parietal lobe (Tissue)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 726.00 20.70 3.09 100.0 SNHG16-266 lncRNA parietal lobe (Tissue)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 317.00 9.04 1.35 100.0 SNHG16-266 lncRNA parietal lobe (Tissue)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 161.00 4.59 0.68 100.0 SNHG16-266 lncRNA parietal lobe (Tissue)
ENST00000741826.1 ENST00000741826.1_184_205_+ 184–205 131.00 61.79 0.56 100.0 MEG8-261 lncRNA parietal lobe (Tissue)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 400.00 38.54 1.70 100.0 NR2F2-AS1-327 lncRNA parietal lobe (Tissue)
ENST00000747675.1 ENST00000747675.1_802_853_+ 802–853 280.00 5.38 1.19 26.22 ENST00000747675 lncRNA parietal lobe (Tissue)
ENST00000747675.1 ENST00000747675.1_817_853_+ 817–853 1491.00 28.67 6.34 100.0 ENST00000747675 lncRNA parietal lobe (Tissue)
ENST00000747675.1 ENST00000747675.1_800_853_+ 800–853 150.00 2.88 0.64 34.88 ENST00000747675 lncRNA parietal lobe (Tissue)
ENST00000747675.1 ENST00000747675.1_804_853_+ 804–853 638.00 12.27 2.71 69.5 ENST00000747675 lncRNA parietal lobe (Tissue)
ENST00000747675.1 ENST00000747675.1_812_853_+ 812–853 318.00 6.12 1.35 100.0 ENST00000747675 lncRNA parietal lobe (Tissue)
ENST00000748458.1 ENST00000748458.1_161_188_+ 161–188 207.00 25.84 0.88 98.1 SNHG26-250 lncRNA parietal lobe (Tissue)
ENST00000748458.1 ENST00000748458.1_161_230_+ 161–230 218.00 27.22 0.93 71.95 SNHG26-250 lncRNA parietal lobe (Tissue)
ENST00000752259.1 ENST00000752259.1_405_425_+ 405–425 128.00 6.71 0.54 100.0 LINC02422-207 lncRNA parietal lobe (Tissue)
ENST00000753088.1 ENST00000753088.1_508_523_+ 508–523 77.00 3.91 0.33 100.0 ENST00000753088 lncRNA parietal lobe (Tissue)