ENCFF001RMG

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000697734.1 ENST00000697734.1_1838_1871_+ 1838–1871 1.00 0.88 0.00 100.0 RPSA-216 retained intron parietal lobe (Tissue)
ENST00000697879.1 ENST00000697879.1_547_564_+ 547–564 894.00 1.00 3.80 71.81 MIR99AHG-370 lncRNA parietal lobe (Tissue)
ENST00000697879.1 ENST00000697879.1_547_568_+ 547–568 86166.00 96.47 366.24 98.86 MIR99AHG-370 lncRNA parietal lobe (Tissue)
ENST00000699245.1 ENST00000699245.1_739_776_+ 739–776 602.00 95.56 2.56 100.0 HPS4-237 retained intron parietal lobe (Tissue)
ENST00000699458.1 ENST00000699458.1_1475_1492_+ 1475–1492 561.00 91.22 2.38 100.0 MEG8-253 lncRNA parietal lobe (Tissue)
ENST00000699460.1 ENST00000699460.1_1623_1644_+ 1623–1644 113.00 37.29 0.48 100.0 MEG9-206 lncRNA parietal lobe (Tissue)
ENST00000699460.1 ENST00000699460.1_1872_1893_+ 1872–1893 41.00 13.53 0.17 100.0 MEG9-206 lncRNA parietal lobe (Tissue)
ENST00000699460.1 ENST00000699460.1_2148_2169_+ 2148–2169 24.00 7.92 0.10 100.0 MEG9-206 lncRNA parietal lobe (Tissue)
ENST00000703637.1 ENST00000703637.1_459_481_+ 459–481 211.00 12.06 0.90 100.0 DNAJC5-203 nonsense mediated decay parietal lobe (Tissue)
ENST00000707189.1 ENST00000707189.1_1316_1333_+ 1316–1333 823.00 14.40 3.50 100.0 ENST00000707189 TEC parietal lobe (Tissue)
ENST00000710424.1 ENST00000710424.1_1932_2007_+ 1932–2007 548.00 0.31 2.33 100.0 MIR17HG-214 lncRNA parietal lobe (Tissue)
ENST00000710424.1 ENST00000710424.1_2162_2183_+ 2162–2183 74947.90 42.14 318.56 51.66 MIR17HG-214 lncRNA parietal lobe (Tissue)
ENST00000710424.1 ENST00000710424.1_1557_1579_+ 1557–1579 131.00 0.07 0.56 100.0 MIR17HG-214 lncRNA parietal lobe (Tissue)
ENST00000710424.1 ENST00000710424.1_1740_1762_+ 1740–1762 2293.00 1.29 9.75 100.0 MIR17HG-214 lncRNA parietal lobe (Tissue)
ENST00000710424.1 ENST00000710424.1_2162_2185_+ 2162–2185 78778.93 44.29 334.84 52.34 MIR17HG-214 lncRNA parietal lobe (Tissue)
ENST00000710424.1 ENST00000710424.1_2046_2067_+ 2046–2067 10971.00 6.17 46.63 100.0 MIR17HG-214 lncRNA parietal lobe (Tissue)
ENST00000710424.1 ENST00000710424.1_2069_2124_+ 2069–2124 261.00 0.15 1.11 100.0 MIR17HG-214 lncRNA parietal lobe (Tissue)
ENST00000710424.1 ENST00000710424.1_1873_1895_+ 1873–1895 4470.00 2.51 19.00 100.0 MIR17HG-214 lncRNA parietal lobe (Tissue)
ENST00000710424.1 ENST00000710424.1_1419_1441_+ 1419–1441 1983.00 1.11 8.43 100.0 MIR17HG-214 lncRNA parietal lobe (Tissue)
ENST00000718227.1 ENST00000718227.1_356_384_+ 356–384 1385.00 0.31 5.89 100.0 SNHG32-223 lncRNA parietal lobe (Tissue)
ENST00000718227.1 ENST00000718227.1_387_419_+ 387–419 1020.00 0.23 4.34 100.0 SNHG32-223 lncRNA parietal lobe (Tissue)
ENST00000718227.1 ENST00000718227.1_359_419_+ 359–419 661.00 0.15 2.81 100.0 SNHG32-223 lncRNA parietal lobe (Tissue)
ENST00000718227.1 ENST00000718227.1_352_421_+ 352–421 2380.00 0.53 10.12 51.76 SNHG32-223 lncRNA parietal lobe (Tissue)
ENST00000718227.1 ENST00000718227.1_356_419_+ 356–419 440601.00 97.29 1872.74 100.0 SNHG32-223 lncRNA parietal lobe (Tissue)
ENST00000718231.1 ENST00000718231.1_1950_2016_+ 1950–2016 45139.00 79.34 191.86 97.71 SNHG32-227 lncRNA parietal lobe (Tissue)