ENCFF001RMG

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000670697.1 ENST00000670697.1_232_313_+ 232–313 13589.00 39.06 57.76 58.38 SNHG14-336 lncRNA parietal lobe (Tissue)
ENST00000670697.1 ENST00000670697.1_233_310_+ 233–310 19468.00 55.97 82.75 86.34 SNHG14-336 lncRNA parietal lobe (Tissue)
ENST00000671491.1 ENST00000671491.1_1778_1868_+ 1778–1868 20396.00 76.06 86.69 95.82 SNHG14-341 lncRNA parietal lobe (Tissue)
ENST00000676514.1 ENST00000676514.1_1978_2054_+ 1978–2054 2072.00 46.21 8.81 100.0 NCL-211 retained intron parietal lobe (Tissue)
ENST00000677786.1 ENST00000677786.1_3513_3605_+ 3513–3605 1.00 0.19 0.00 100.0 NCL-216 retained intron parietal lobe (Tissue)
ENST00000679646.1 ENST00000679646.1_899_921_+ 899–921 388.00 6.70 1.65 100.0 FMN2-209 protein coding CDS not defined parietal lobe (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1423_+ 1409–1423 38.00 1.04 0.16 50.0 LINC02739-203 lncRNA parietal lobe (Tissue)
ENST00000685142.3 ENST00000685142.3_1449_1480_+ 1449–1480 1.00 0.03 0.00 100.0 LINC02739-203 lncRNA parietal lobe (Tissue)
ENST00000685142.3 ENST00000685142.3_1421_1436_+ 1421–1436 394.00 10.75 1.67 100.0 LINC02739-203 lncRNA parietal lobe (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1440_+ 1409–1440 620.00 16.92 2.64 100.0 LINC02739-203 lncRNA parietal lobe (Tissue)
ENST00000685142.3 ENST00000685142.3_1405_1444_+ 1405–1444 280.00 7.64 1.19 100.0 LINC02739-203 lncRNA parietal lobe (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1421_+ 1409–1421 38.00 1.04 0.16 50.0 LINC02739-203 lncRNA parietal lobe (Tissue)
ENST00000685227.3 ENST00000685227.3_1036_1055_+ 1036–1055 61567.00 90.89 261.69 100.0 MIR124-1HG-216 lncRNA parietal lobe (Tissue)
ENST00000685307.3 ENST00000685307.3_1198_1226_+ 1198–1226 125.00 17.46 0.53 100.0 SNHG10-212 lncRNA parietal lobe (Tissue)
ENST00000686899.3 ENST00000686899.3_562_648_+ 562–648 9.32 0.02 0.04 84.76 SNHG19-202 lncRNA parietal lobe (Tissue)
ENST00000686899.3 ENST00000686899.3_568_649_+ 568–649 22070.13 50.63 93.81 53.27 SNHG19-202 lncRNA parietal lobe (Tissue)
ENST00000686899.3 ENST00000686899.3_568_647_+ 568–647 19150.31 43.93 81.40 58.56 SNHG19-202 lncRNA parietal lobe (Tissue)
ENST00000686899.3 ENST00000686899.3_562_650_+ 562–650 2.16 0.00 0.01 72.05 SNHG19-202 lncRNA parietal lobe (Tissue)
ENST00000688264.3 ENST00000688264.3_548_571_+ 548–571 2770.00 22.51 11.77 100.0 MIR222HG-206 lncRNA parietal lobe (Tissue)
ENST00000688264.3 ENST00000688264.3_1402_1424_+ 1402–1424 6258.00 50.86 26.60 77.55 MIR222HG-206 lncRNA parietal lobe (Tissue)
ENST00000688264.3 ENST00000688264.3_1362_1387_+ 1362–1387 153.00 1.24 0.65 100.0 MIR222HG-206 lncRNA parietal lobe (Tissue)
ENST00000688371.3 ENST00000688371.3_190_212_+ 190–212 0.95 18.90 0.00 94.5 MIR302CHG-205 lncRNA parietal lobe (Tissue)
ENST00000688371.3 ENST00000688371.3_313_333_+ 313–333 1.00 20.00 0.00 100.0 MIR302CHG-205 lncRNA parietal lobe (Tissue)
ENST00000688371.3 ENST00000688371.3_673_694_+ 673–694 1.00 20.00 0.00 100.0 MIR302CHG-205 lncRNA parietal lobe (Tissue)
ENST00000688371.3 ENST00000688371.3_458_478_+ 458–478 2.00 40.00 0.01 100.0 MIR302CHG-205 lncRNA parietal lobe (Tissue)