ENCFF001RMG

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 603.00 33.31 2.56 100.0 MEG8-222 lncRNA parietal lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_7388_7482_+ 7388–7482 13207.00 7.00 56.14 92.19 SNHG14-224 lncRNA parietal lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 71970.00 38.13 305.90 92.03 SNHG14-224 lncRNA parietal lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_9465_9551_+ 9465–9551 15940.00 8.44 67.75 100.0 SNHG14-224 lncRNA parietal lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_5267_5357_+ 5267–5357 11026.00 5.84 46.87 88.97 SNHG14-224 lncRNA parietal lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 298.00 0.16 1.27 100.0 SNHG14-224 lncRNA parietal lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_7389_7479_+ 7389–7479 3918.00 2.08 16.65 47.6 SNHG14-224 lncRNA parietal lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 22405.00 11.87 95.23 69.37 SNHG14-224 lncRNA parietal lobe (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 22438.00 11.89 95.37 69.06 SNHG14-224 lncRNA parietal lobe (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 812.65 21.26 3.45 75.11 5S_rRNA.20-201 rRNA pseudogene parietal lobe (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 250.00 0.77 1.06 100.0 HSPA9-211 retained intron parietal lobe (Tissue)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 25503.00 79.03 108.40 88.11 HSPA9-211 retained intron parietal lobe (Tissue)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 567.00 88.32 2.41 100.0 DNM3OS-205 lncRNA parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 251.00 0.04 1.07 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 218.00 0.03 0.93 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 2513.00 0.36 10.68 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1648_1723_+ 1648–1723 664.00 0.09 2.82 67.55 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 9396.00 1.33 39.94 97.74 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 256.00 0.04 1.09 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 166.00 0.02 0.71 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 241.00 0.03 1.02 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 408849.00 58.02 1737.78 99.75 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 1072.00 0.15 4.56 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 955.00 0.14 4.06 100.0 GAS5-230 retained intron parietal lobe (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 517.00 0.07 2.20 100.0 GAS5-230 retained intron parietal lobe (Tissue)