ENCFF001RMG

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 7896.00 2.33 33.56 34.28 U2.3-201 snRNA parietal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_1_70_+ 1–70 4670.00 1.38 19.85 82.1 U2.3-201 snRNA parietal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_95_188_+ 95–188 3505.23 1.04 14.90 71.4 U2.3-201 snRNA parietal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 49.00 0.01 0.21 100.0 U2.3-201 snRNA parietal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 6.00 0.00 0.03 100.0 U2.3-201 snRNA parietal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_1_75_+ 1–75 261.00 0.08 1.11 100.0 U2.3-201 snRNA parietal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_22_116_+ 22–116 714.00 0.21 3.03 100.0 U2.3-201 snRNA parietal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_1_90_+ 1–90 16295.58 4.82 69.26 47.33 U2.3-201 snRNA parietal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_1_92_+ 1–92 8758.04 2.59 37.23 39.29 U2.3-201 snRNA parietal lobe (Tissue)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 2289.00 0.69 9.73 100.0 U2.6-201 snRNA parietal lobe (Tissue)
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 974.00 1.12 4.14 59.61 ENST00000619323 lncRNA parietal lobe (Tissue)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 83865.00 96.53 356.46 98.49 ENST00000619323 lncRNA parietal lobe (Tissue)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 87.00 12.25 0.37 100.0 SCARNA4-202 scaRNA parietal lobe (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 1593.00 71.79 6.77 100.0 ENST00000625572 miRNA parietal lobe (Tissue)
ENST00000628177.1 ENST00000628177.1_1_79_+ 1–79 11864.00 93.26 50.43 100.0 ENST00000628177 snoRNA parietal lobe (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 6772.00 93.03 28.78 100.0 ENST00000630615 snoRNA parietal lobe (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 410.00 52.50 1.74 100.0 DMRT2-209 protein coding parietal lobe (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 2.00 0.26 0.01 100.0 DMRT2-209 protein coding parietal lobe (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 753.00 9.96 3.20 100.0 SNORD98-201 snoRNA parietal lobe (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 5378.00 71.10 22.86 100.0 SNORD98-201 snoRNA parietal lobe (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 59090.48 41.53 251.16 46.84 MIR106AHG-201 lncRNA parietal lobe (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 301.19 0.21 1.28 34.5 MIR106AHG-201 lncRNA parietal lobe (Tissue)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 73.00 0.05 0.31 100.0 MIR106AHG-201 lncRNA parietal lobe (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 533.35 0.37 2.27 61.09 MIR106AHG-201 lncRNA parietal lobe (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 233.00 12.87 0.99 100.0 MEG8-222 lncRNA parietal lobe (Tissue)