ENCFF001RMG

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000607441.3 ENST00000607441.3_43_63_+ 43–63 183.00 86.32 0.78 100.0 MIR376C-201 miRNA parietal lobe (Tissue)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 576.00 61.94 2.45 100.0 SNHG21-206 retained intron parietal lobe (Tissue)
ENST00000607707.1 ENST00000607707.1_5_84_+ 5–84 76.00 13.89 0.32 100.0 SNORD11B-201 snoRNA parietal lobe (Tissue)
ENST00000608459.2 ENST00000608459.2_31_111_+ 31–111 8289.00 81.01 35.23 100.0 SNORD91B-201 snoRNA parietal lobe (Tissue)
ENST00000608502.2 ENST00000608502.2_858_879_+ 858–879 30.00 44.12 0.13 100.0 MIR219A2HG-201 lncRNA parietal lobe (Tissue)
ENST00000609620.2 ENST00000609620.2_7_86_+ 7–86 31752.00 76.86 134.96 89.08 SNORD91A-201 snoRNA parietal lobe (Tissue)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 1165.00 44.31 4.95 95.96 MIR486-1-201 miRNA parietal lobe (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 18118.00 22.32 77.01 68.28 NOP56-219 retained intron parietal lobe (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 808.00 1.00 3.43 100.0 NOP56-219 retained intron parietal lobe (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 3544.00 4.37 15.06 100.0 NOP56-219 retained intron parietal lobe (Tissue)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 38623.00 47.59 164.16 86.15 NOP56-219 retained intron parietal lobe (Tissue)
ENST00000612463.1 ENST00000612463.1_1_83_+ 1–83 333.00 11.64 1.42 45.31 RNA5-8SN2-201 rRNA parietal lobe (Tissue)
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 0.82 0.03 0.00 82.09 RNA5-8SN2-201 rRNA parietal lobe (Tissue)
ENST00000612463.1 ENST00000612463.1_1_50_+ 1–50 2.00 0.07 0.01 100.0 RNA5-8SN2-201 rRNA parietal lobe (Tissue)
ENST00000612463.1 ENST00000612463.1_1_25_+ 1–25 137.00 4.79 0.58 100.0 RNA5-8SN2-201 rRNA parietal lobe (Tissue)
ENST00000612463.1 ENST00000612463.1_10_37_+ 10–37 26.00 0.91 0.11 100.0 RNA5-8SN2-201 rRNA parietal lobe (Tissue)
ENST00000612463.1 ENST00000612463.1_1_81_+ 1–81 513.00 17.92 2.18 60.64 RNA5-8SN2-201 rRNA parietal lobe (Tissue)
ENST00000615835.1 ENST00000615835.1_56_79_+ 56–79 2.00 100.00 0.01 100.0 MIR7974-201 miRNA parietal lobe (Tissue)
ENST00000616574.2 ENST00000616574.2_44_64_+ 44–64 15.00 10.07 0.06 100.0 MIR376A1-201 miRNA parietal lobe (Tissue)
ENST00000616574.2 ENST00000616574.2_7_27_+ 7–27 69.00 46.31 0.29 100.0 MIR376A1-201 miRNA parietal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 1368.00 0.40 5.81 100.0 U2.3-201 snRNA parietal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_93_187_+ 93–187 1627.16 0.48 6.92 33.15 U2.3-201 snRNA parietal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_1_95_+ 1–95 217855.00 64.39 925.97 98.54 U2.3-201 snRNA parietal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_99_187_+ 99–187 13.00 0.00 0.06 100.0 U2.3-201 snRNA parietal lobe (Tissue)
ENST00000617785.1 ENST00000617785.1_1_87_+ 1–87 25713.00 7.60 109.29 72.36 U2.3-201 snRNA parietal lobe (Tissue)