ENCFF001RMG

Library Details

Organism: Homo Sapiens
Biosample: parietal lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFY
Description: Part of ENCODE experiment ENCSR000AFY. The libraries contained in this experiment come from human fetal parietal lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000489392.1 ENST00000489392.1_151_191_+ 151–191 470.00 2.08 2.00 100.0 RPL7A-207 protein coding CDS not defined parietal lobe (Tissue)
ENST00000490232.3 ENST00000490232.3_219_300_+ 219–300 92.00 1.78 0.39 100.0 RN7SL2-201 misc RNA parietal lobe (Tissue)
ENST00000490232.3 ENST00000490232.3_229_300_+ 229–300 277.00 5.36 1.18 22.5 RN7SL2-201 misc RNA parietal lobe (Tissue)
ENST00000494697.5 ENST00000494697.5_274_348_+ 274–348 34610.00 78.73 147.11 87.44 NOP56-217 protein coding CDS not defined parietal lobe (Tissue)
ENST00000494697.5 ENST00000494697.5_306_348_+ 306–348 2184.00 4.97 9.28 96.38 NOP56-217 protein coding CDS not defined parietal lobe (Tissue)
ENST00000496055.5 ENST00000496055.5_2059_2091_+ 2059–2091 361.00 0.29 1.53 100.0 RABGGTB-213 protein coding CDS not defined parietal lobe (Tissue)
ENST00000496055.5 ENST00000496055.5_471_552_+ 471–552 82834.00 66.45 352.08 93.57 RABGGTB-213 protein coding CDS not defined parietal lobe (Tissue)
ENST00000496055.5 ENST00000496055.5_2059_2126_+ 2059–2126 21385.00 17.15 90.90 86.86 RABGGTB-213 protein coding CDS not defined parietal lobe (Tissue)
ENST00000496055.5 ENST00000496055.5_471_515_+ 471–515 127.00 0.10 0.54 52.7 RABGGTB-213 protein coding CDS not defined parietal lobe (Tissue)
ENST00000496055.5 ENST00000496055.5_505_553_+ 505–553 679.00 0.54 2.89 100.0 RABGGTB-213 protein coding CDS not defined parietal lobe (Tissue)
ENST00000496055.5 ENST00000496055.5_493_553_+ 493–553 1670.00 1.34 7.10 100.0 RABGGTB-213 protein coding CDS not defined parietal lobe (Tissue)
ENST00000496055.5 ENST00000496055.5_471_517_+ 471–517 114.00 0.09 0.48 47.3 RABGGTB-213 protein coding CDS not defined parietal lobe (Tissue)
ENST00000496254.5 ENST00000496254.5_747_811_+ 747–811 29230.00 83.23 124.24 100.0 GNL3-211 retained intron parietal lobe (Tissue)
ENST00000496254.5 ENST00000496254.5_774_811_+ 774–811 2354.00 6.70 10.01 100.0 GNL3-211 retained intron parietal lobe (Tissue)
ENST00000497519.1 ENST00000497519.1_681_708_+ 681–708 312.00 4.75 1.33 100.0 RPL5-205 retained intron parietal lobe (Tissue)
ENST00000497519.1 ENST00000497519.1_681_769_+ 681–769 4967.00 75.67 21.11 100.0 RPL5-205 retained intron parietal lobe (Tissue)
ENST00000499525.1 ENST00000499525.1_506_558_+ 506–558 133.00 20.27 0.57 100.0 ZBED9-AS1-201 lncRNA parietal lobe (Tissue)
ENST00000507485.1 ENST00000507485.1_1149_1210_+ 1149–1210 16501.00 91.74 70.14 100.0 RPS3A-206 retained intron parietal lobe (Tissue)
ENST00000509578.1 ENST00000509578.1_1330_1389_+ 1330–1389 61483.00 95.31 261.33 100.0 COX7C-203 protein coding parietal lobe (Tissue)
ENST00000513027.3 ENST00000513027.3_241_308_+ 241–308 39753.91 23.13 168.97 30.74 RACK1-229 protein coding parietal lobe (Tissue)
ENST00000513027.3 ENST00000513027.3_241_306_+ 241–306 120549.17 70.15 512.38 74.27 RACK1-229 protein coding parietal lobe (Tissue)
ENST00000513027.3 ENST00000513027.3_272_305_+ 272–305 1870.00 1.09 7.95 76.23 RACK1-229 protein coding parietal lobe (Tissue)
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 320.00 0.19 1.36 100.0 RACK1-229 protein coding parietal lobe (Tissue)
ENST00000513060.5 ENST00000513060.5_712_783_+ 712–783 140124.00 42.74 595.58 82.63 RACK1-230 retained intron parietal lobe (Tissue)
ENST00000513060.5 ENST00000513060.5_713_786_+ 713–786 180464.00 55.04 767.05 76.05 RACK1-230 retained intron parietal lobe (Tissue)