ENCFF001RMF

Library Details

Organism: Homo Sapiens
Biosample: metanephros (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFU
Description: Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 316.00 4.41 0.59 33.47 RNY1-201 misc RNA metanephros (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 896.31 12.51 1.67 62.9 RNY1-201 misc RNA metanephros (Tissue)
ENST00000364228.1 ENST00000364228.1_24_109_+ 24–109 665.00 9.28 1.24 100.0 RNY1-201 misc RNA metanephros (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 109.00 1.52 0.20 100.0 RNY1-201 misc RNA metanephros (Tissue)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 334.00 4.66 0.62 100.0 RNY1-201 misc RNA metanephros (Tissue)
ENST00000364273.1 ENST00000364273.1_2_82_+ 2–82 77.00 21.10 0.14 100.0 SNORD115-42-201 snoRNA metanephros (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 167.00 2.06 0.31 100.0 RNA5SP202-201 rRNA pseudogene metanephros (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 1390.00 17.15 2.59 100.0 RNA5SP202-201 rRNA pseudogene metanephros (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 63.00 0.78 0.12 100.0 RNA5SP202-201 rRNA pseudogene metanephros (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 45.00 0.56 0.08 100.0 RNA5SP202-201 rRNA pseudogene metanephros (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 52.79 0.65 0.10 36.91 RNA5SP202-201 rRNA pseudogene metanephros (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 132.00 1.63 0.25 100.0 RNA5SP202-201 rRNA pseudogene metanephros (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 528.00 6.52 0.98 100.0 RNA5SP202-201 rRNA pseudogene metanephros (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 351.22 4.33 0.65 39.78 RNA5SP202-201 rRNA pseudogene metanephros (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 91.09 1.12 0.17 61.96 RNA5SP202-201 rRNA pseudogene metanephros (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 2462.00 31.32 4.58 100.0 SNORD114-9-201 snoRNA metanephros (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 4371.00 55.61 8.13 100.0 SNORD114-9-201 snoRNA metanephros (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 588.00 7.46 1.09 100.0 Y_RNA.234-201 misc RNA metanephros (Tissue)
ENST00000364461.1 ENST00000364461.1_2_82_+ 2–82 67.00 65.05 0.12 100.0 SNORD115-23-201 snoRNA metanephros (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 75.00 4.97 0.14 100.0 RNA5SP141-201 rRNA pseudogene metanephros (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 290.00 58.23 0.54 100.0 SNORD114-15-201 snoRNA metanephros (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 1176.00 36.12 2.19 100.0 ENST00000364722 snoRNA metanephros (Tissue)
ENST00000364809.1 ENST00000364809.1_2_81_+ 2–81 130.00 29.41 0.24 100.0 SNORD115-15-201 snoRNA metanephros (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 237.00 29.44 0.44 100.0 SNORD113-3-201 snoRNA metanephros (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 21445.00 69.26 39.90 100.0 SNORD52-201 snoRNA metanephros (Tissue)