ENCFF001RMF
Library Details
| Organism: | Homo Sapiens |
|---|---|
| Biosample: | metanephros (Tissue) |
| GEO DB ID: | Not available |
| ENCODE Experiment ID: | ENCSR000AFU |
| Description: | Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size |
|---|---|
| Author: | Thomas Gingeras, CSHL |
sncRNAs in this Library
| Precursor Transcript ID | sncRNA Name | sncRNA position in precursor | Expression | Expression Fraction | Expression (CPM) | Prominence | Transcript Name | Transcript Type | Biosample |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000362912.1 | ENST00000362912.1_2_82_+ | 2–82 | 581.00 | 62.27 | 1.08 | 96.35 | SNORD115-9-201 | snoRNA | metanephros (Tissue) |
| ENST00000362973.1 | ENST00000362973.1_96_117_+ | 96–117 | 1947.00 | 40.14 | 3.62 | 86.65 | RNA5SP358-201 | rRNA pseudogene | metanephros (Tissue) |
| ENST00000363124.1 | ENST00000363124.1_17_32_+ | 17–32 | 40.00 | 1.33 | 0.07 | 67.8 | RNA5SP145-201 | rRNA pseudogene | metanephros (Tissue) |
| ENST00000363182.1 | ENST00000363182.1_1_32_+ | 1–32 | 17.00 | 17.89 | 0.03 | 100.0 | Y_RNA.105-201 | misc RNA | metanephros (Tissue) |
| ENST00000363194.1 | ENST00000363194.1_1_32_+ | 1–32 | 195.00 | 33.51 | 0.36 | 100.0 | RNY4P9-201 | misc RNA | metanephros (Tissue) |
| ENST00000363286.1 | ENST00000363286.1_55_116_+ | 55–116 | 6144.00 | 12.94 | 11.43 | 100.0 | RNU5B-1-201 | snRNA | metanephros (Tissue) |
| ENST00000363286.1 | ENST00000363286.1_63_116_+ | 63–116 | 2060.00 | 4.34 | 3.83 | 100.0 | RNU5B-1-201 | snRNA | metanephros (Tissue) |
| ENST00000363286.1 | ENST00000363286.1_68_116_+ | 68–116 | 347.00 | 0.73 | 0.65 | 100.0 | RNU5B-1-201 | snRNA | metanephros (Tissue) |
| ENST00000363286.1 | ENST00000363286.1_1_78_+ | 1–78 | 12021.00 | 25.31 | 22.36 | 92.68 | RNU5B-1-201 | snRNA | metanephros (Tissue) |
| ENST00000363286.1 | ENST00000363286.1_1_69_+ | 1–69 | 77.00 | 0.16 | 0.14 | 100.0 | RNU5B-1-201 | snRNA | metanephros (Tissue) |
| ENST00000363286.1 | ENST00000363286.1_1_86_+ | 1–86 | 7981.00 | 16.80 | 14.85 | 100.0 | RNU5B-1-201 | snRNA | metanephros (Tissue) |
| ENST00000363293.1 | ENST00000363293.1_2_82_+ | 2–82 | 2060.00 | 93.47 | 3.83 | 98.38 | SNORD115-18-201 | snoRNA | metanephros (Tissue) |
| ENST00000363341.1 | ENST00000363341.1_1_36_+ | 1–36 | 146.00 | 4.92 | 0.27 | 76.44 | RNY4P27-201 | misc RNA | metanephros (Tissue) |
| ENST00000363341.1 | ENST00000363341.1_1_32_+ | 1–32 | 1465.00 | 49.33 | 2.73 | 97.02 | RNY4P27-201 | misc RNA | metanephros (Tissue) |
| ENST00000363444.1 | ENST00000363444.1_74_99_+ | 74–99 | 291.00 | 5.56 | 0.54 | 100.0 | Y_RNA.136-201 | misc RNA | metanephros (Tissue) |
| ENST00000363608.1 | ENST00000363608.1_2_82_+ | 2–82 | 381.00 | 55.95 | 0.71 | 100.0 | SNORD115-41-201 | snoRNA | metanephros (Tissue) |
| ENST00000363633.1 | ENST00000363633.1_2_82_+ | 2–82 | 58.00 | 15.47 | 0.11 | 100.0 | SNORD115-5-201 | snoRNA | metanephros (Tissue) |
| ENST00000363723.1 | ENST00000363723.1_2_82_+ | 2–82 | 109.00 | 47.60 | 0.20 | 100.0 | SNORD115-33-201 | snoRNA | metanephros (Tissue) |
| ENST00000363742.1 | ENST00000363742.1_4_67_+ | 4–67 | 6118.00 | 91.35 | 11.38 | 97.0 | SNORD114-25-201 | snoRNA | metanephros (Tissue) |
| ENST00000363762.1 | ENST00000363762.1_3_72_+ | 3–72 | 14941.00 | 95.51 | 27.80 | 100.0 | SNORD113-7-201 | snoRNA | metanephros (Tissue) |
| ENST00000363856.1 | ENST00000363856.1_2_82_+ | 2–82 | 105.00 | 32.81 | 0.20 | 100.0 | SNORD115-8-201 | snoRNA | metanephros (Tissue) |
| ENST00000363872.1 | ENST00000363872.1_74_98_+ | 74–98 | 187.00 | 20.33 | 0.35 | 100.0 | Y_RNA.181-201 | misc RNA | metanephros (Tissue) |
| ENST00000363887.1 | ENST00000363887.1_2_82_+ | 2–82 | 234.00 | 44.32 | 0.44 | 100.0 | SNORD115-16-201 | snoRNA | metanephros (Tissue) |
| ENST00000364079.1 | ENST00000364079.1_2_82_+ | 2–82 | 76.00 | 42.94 | 0.14 | 100.0 | SNORD115-32-201 | snoRNA | metanephros (Tissue) |
| ENST00000364117.1 | ENST00000364117.1_2_82_+ | 2–82 | 101.00 | 43.72 | 0.19 | 100.0 | SNORD115-30-201 | snoRNA | metanephros (Tissue) |