ENCFF001RMF

Library Details

Organism: Homo Sapiens
Biosample: metanephros (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFU
Description: Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 251.00 3.77 0.47 100.0 SNHG16-266 lncRNA metanephros (Tissue)
ENST00000741826.1 ENST00000741826.1_184_205_+ 184–205 121.00 50.42 0.23 100.0 MEG8-261 lncRNA metanephros (Tissue)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 767.00 63.28 1.43 100.0 NR2F2-AS1-327 lncRNA metanephros (Tissue)
ENST00000747675.1 ENST00000747675.1_802_853_+ 802–853 106.00 6.40 0.20 31.74 ENST00000747675 lncRNA metanephros (Tissue)
ENST00000747675.1 ENST00000747675.1_817_853_+ 817–853 348.00 21.01 0.65 100.0 ENST00000747675 lncRNA metanephros (Tissue)
ENST00000747675.1 ENST00000747675.1_800_853_+ 800–853 151.00 9.12 0.28 58.75 ENST00000747675 lncRNA metanephros (Tissue)
ENST00000747675.1 ENST00000747675.1_804_853_+ 804–853 77.00 4.65 0.14 42.08 ENST00000747675 lncRNA metanephros (Tissue)
ENST00000747675.1 ENST00000747675.1_812_853_+ 812–853 169.00 10.21 0.31 100.0 ENST00000747675 lncRNA metanephros (Tissue)
ENST00000748458.1 ENST00000748458.1_161_188_+ 161–188 2768.00 61.99 5.15 94.25 SNHG26-250 lncRNA metanephros (Tissue)
ENST00000748458.1 ENST00000748458.1_161_230_+ 161–230 770.00 17.25 1.43 87.4 SNHG26-250 lncRNA metanephros (Tissue)
ENST00000752259.1 ENST00000752259.1_405_425_+ 405–425 51.00 7.89 0.09 100.0 LINC02422-207 lncRNA metanephros (Tissue)
ENST00000753088.1 ENST00000753088.1_508_523_+ 508–523 28.00 2.41 0.05 100.0 ENST00000753088 lncRNA metanephros (Tissue)
ENST00000753088.1 ENST00000753088.1_508_542_+ 508–542 30.00 2.58 0.06 100.0 ENST00000753088 lncRNA metanephros (Tissue)
ENST00000756336.1 ENST00000756336.1_98_127_+ 98–127 174.75 1.32 0.33 26.93 ENST00000756336 lncRNA metanephros (Tissue)
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 312.00 2.36 0.58 100.0 ENST00000756336 lncRNA metanephros (Tissue)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 1551.00 11.71 2.89 100.0 ENST00000756336 lncRNA metanephros (Tissue)
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 95.00 0.72 0.18 100.0 ENST00000756336 lncRNA metanephros (Tissue)
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 1210.80 9.14 2.25 47.93 ENST00000756336 lncRNA metanephros (Tissue)
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 1811.33 13.68 3.37 62.81 ENST00000756336 lncRNA metanephros (Tissue)
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 407.36 3.08 0.76 11.78 ENST00000756336 lncRNA metanephros (Tissue)
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 48.55 0.37 0.09 30.54 ENST00000756336 lncRNA metanephros (Tissue)
ENST00000756336.1 ENST00000756336.1_98_172_+ 98–172 203.00 1.53 0.38 100.0 ENST00000756336 lncRNA metanephros (Tissue)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 4500.88 33.99 8.37 91.0 ENST00000756336 lncRNA metanephros (Tissue)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 92.00 70.77 0.17 100.0 ENST00000756452 lncRNA metanephros (Tissue)
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 300.00 26.69 0.56 100.0 ENST00000760093 lncRNA metanephros (Tissue)