ENCFF001RMF

Library Details

Organism: Homo Sapiens
Biosample: metanephros (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFU
Description: Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362291.1 ENST00000362291.1_52_73_+ 52–73 16639.00 30.60 30.96 97.21 MIR126-201 miRNA metanephros (Tissue)
ENST00000362291.1 ENST00000362291.1_15_35_+ 15–35 36229.00 66.62 67.40 100.0 MIR126-201 miRNA metanephros (Tissue)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 174.00 23.48 0.32 100.0 MIR374A-201 miRNA metanephros (Tissue)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 335.00 69.50 0.62 100.0 MIR31-201 miRNA metanephros (Tissue)
ENST00000362400.1 ENST00000362400.1_5_95_+ 5–95 583.00 4.71 1.08 99.32 RNA5S12-201 rRNA metanephros (Tissue)
ENST00000362400.1 ENST00000362400.1_1_83_+ 1–83 17.00 0.14 0.03 80.95 RNA5S12-201 rRNA metanephros (Tissue)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 133.00 1.07 0.25 79.17 RNA5S12-201 rRNA metanephros (Tissue)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 101.00 0.82 0.19 100.0 RNA5S12-201 rRNA metanephros (Tissue)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 5.00 0.04 0.01 11.63 RNA5S12-201 rRNA metanephros (Tissue)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 4.00 0.03 0.01 100.0 RNA5S12-201 rRNA metanephros (Tissue)
ENST00000362400.1 ENST00000362400.1_15_95_+ 15–95 41.55 0.34 0.08 61.11 RNA5S12-201 rRNA metanephros (Tissue)
ENST00000362400.1 ENST00000362400.1_23_95_+ 23–95 191.00 1.54 0.36 86.43 RNA5S12-201 rRNA metanephros (Tissue)
ENST00000362400.1 ENST00000362400.1_20_95_+ 20–95 52.00 0.42 0.10 42.62 RNA5S12-201 rRNA metanephros (Tissue)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 37.00 0.30 0.07 78.72 RNA5S12-201 rRNA metanephros (Tissue)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 15.00 0.12 0.03 100.0 RNA5S12-201 rRNA metanephros (Tissue)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 25.00 0.20 0.05 78.12 RNA5S12-201 rRNA metanephros (Tissue)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 37.60 0.30 0.07 32.98 RNA5S12-201 rRNA metanephros (Tissue)
ENST00000362400.1 ENST00000362400.1_17_95_+ 17–95 43.92 0.35 0.08 57.79 RNA5S12-201 rRNA metanephros (Tissue)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 10.00 0.08 0.02 52.63 RNA5S12-201 rRNA metanephros (Tissue)
ENST00000362400.1 ENST00000362400.1_12_95_+ 12–95 31.00 0.25 0.06 64.58 RNA5S12-201 rRNA metanephros (Tissue)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 141.91 1.15 0.26 61.17 RNA5S12-201 rRNA metanephros (Tissue)
ENST00000362400.1 ENST00000362400.1_1_95_+ 1–95 798.00 6.44 1.48 99.5 RNA5S12-201 rRNA metanephros (Tissue)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 172.00 1.39 0.32 95.03 RNA5S12-201 rRNA metanephros (Tissue)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 460.00 28.68 0.86 100.0 Y_RNA.14-201 misc RNA metanephros (Tissue)
ENST00000362441.1 ENST00000362441.1_2_82_+ 2–82 92.00 24.34 0.17 100.0 SNORD115-34-201 snoRNA metanephros (Tissue)