ENCFF001RMF

Library Details

Organism: Homo Sapiens
Biosample: metanephros (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFU
Description: Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 666.00 48.97 1.24 100.0 MIR542-201 miRNA metanephros (Tissue)
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 849.00 4.89 1.58 100.0 MIR500A-201 miRNA metanephros (Tissue)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 11961.00 68.93 22.25 100.0 MIR500A-201 miRNA metanephros (Tissue)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 2473.00 0.33 4.60 100.0 MIR30A-201 miRNA metanephros (Tissue)
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 544579.00 72.89 1013.17 94.71 MIR30A-201 miRNA metanephros (Tissue)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 15468.00 2.07 28.78 100.0 MIR30A-201 miRNA metanephros (Tissue)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 148100.00 19.82 275.53 82.95 MIR30A-201 miRNA metanephros (Tissue)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 692.00 0.32 1.29 100.0 MIR27B-201 miRNA metanephros (Tissue)
ENST00000385129.3 ENST00000385129.3_61_80_+ 61–80 189146.00 88.40 351.90 91.4 MIR27B-201 miRNA metanephros (Tissue)
ENST00000385189.3 ENST00000385189.3_25_47_+ 25–47 14536.00 90.74 27.04 100.0 MIR196A2-201 miRNA metanephros (Tissue)
ENST00000385196.1 ENST00000385196.1_15_36_+ 15–36 470.00 77.69 0.87 100.0 MIR577-201 miRNA metanephros (Tissue)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 2469.00 80.87 4.59 87.77 MIR654-201 miRNA metanephros (Tissue)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 93684.00 94.55 174.30 96.03 MIR204-201 miRNA metanephros (Tissue)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 4508.00 92.02 8.39 100.0 MIR152-201 miRNA metanephros (Tissue)
ENST00000385219.1 ENST00000385219.1_23_45_+ 23–45 13.00 59.09 0.02 100.0 MIR138-1-201 miRNA metanephros (Tissue)
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 51425.00 94.92 95.67 100.0 MIR30C1-201 miRNA metanephros (Tissue)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 3361.00 85.54 6.25 100.0 MIR660-201 miRNA metanephros (Tissue)
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 1312.00 1.65 2.44 100.0 MIR125B1-201 miRNA metanephros (Tissue)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 66420.00 83.46 123.57 95.43 MIR125B1-201 miRNA metanephros (Tissue)
ENST00000385254.3 ENST00000385254.3_57_78_+ 57–78 201.00 29.65 0.37 100.0 MIR493-201 miRNA metanephros (Tissue)
ENST00000385254.3 ENST00000385254.3_16_37_+ 16–37 377.00 55.60 0.70 100.0 MIR493-201 miRNA metanephros (Tissue)
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 13646.11 32.87 25.39 36.39 MIR182-201 miRNA metanephros (Tissue)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 27246.79 65.63 50.69 72.91 MIR182-201 miRNA metanephros (Tissue)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 182939.00 96.50 340.35 97.32 MIR100-201 miRNA metanephros (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 484.00 89.13 0.90 100.0 MIR301A-201 miRNA metanephros (Tissue)