ENCFF001RMF

Library Details

Organism: Homo Sapiens
Biosample: metanephros (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFU
Description: Part of ENCODE experiment ENCSR000AFU. The libraries contained in this experiment come from human fetal kidney tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 1418.00 90.61 2.64 100.0 MIR194-1-201 miRNA metanephros (Tissue)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 1609.00 84.46 2.99 86.74 MIR128-2-201 miRNA metanephros (Tissue)
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 9734.00 85.79 18.11 96.23 MIR99A-201 miRNA metanephros (Tissue)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 3156.00 9.75 5.87 86.56 MIR28-201 miRNA metanephros (Tissue)
ENST00000384918.1 ENST00000384918.1_54_71_+ 54–71 124.00 0.38 0.23 100.0 MIR28-201 miRNA metanephros (Tissue)
ENST00000384918.1 ENST00000384918.1_54_75_+ 54–75 26837.00 82.90 49.93 95.11 MIR28-201 miRNA metanephros (Tissue)
ENST00000384958.1 ENST00000384958.1_27_48_+ 27–48 3258.00 66.60 6.06 100.0 MIR183-201 miRNA metanephros (Tissue)
ENST00000384967.1 ENST00000384967.1_16_38_+ 16–38 4500.00 80.80 8.37 100.0 MIR145-201 miRNA metanephros (Tissue)
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 344.00 6.18 0.64 100.0 MIR145-201 miRNA metanephros (Tissue)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 36173.00 97.47 67.30 98.56 MIR186-201 miRNA metanephros (Tissue)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 24123.00 88.51 44.88 100.0 MIR200B-201 miRNA metanephros (Tissue)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 714.00 62.09 1.33 100.0 MIR218-1-201 miRNA metanephros (Tissue)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 37133.00 88.36 69.08 92.94 MIR181B2-201 miRNA metanephros (Tissue)
ENST00000385010.3 ENST00000385010.3_50_71_+ 50–71 38.00 44.71 0.07 100.0 MIR495-201 miRNA metanephros (Tissue)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 7524013.00 86.34 13998.14 86.81 MIR10B-201 miRNA metanephros (Tissue)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 670.00 13.57 1.25 100.0 MIR130B-201 miRNA metanephros (Tissue)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 2584.63 52.33 4.81 68.87 MIR130B-201 miRNA metanephros (Tissue)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 1673.06 33.87 3.11 41.33 MIR130B-201 miRNA metanephros (Tissue)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 21021.00 20.43 39.11 100.0 MIR199A1-201 miRNA metanephros (Tissue)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 229.00 76.85 0.43 100.0 MIR487B-201 miRNA metanephros (Tissue)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 10432.88 56.47 19.41 58.5 MIR93-201 miRNA metanephros (Tissue)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 7455.94 40.35 13.87 48.78 MIR93-201 miRNA metanephros (Tissue)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 10501.00 83.67 19.54 93.88 MIR532-201 miRNA metanephros (Tissue)
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 564.00 74.02 1.05 100.0 MIR15B-201 miRNA metanephros (Tissue)
ENST00000385048.3 ENST00000385048.3_16_37_+ 16–37 205.00 90.71 0.38 100.0 MIR150-201 miRNA metanephros (Tissue)