ENCFF001RME

Library Details

Organism: Homo Sapiens
Biosample: occipital lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFX
Description: Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 459.00 51.86 0.97 100.0 Y_RNA.389-201 misc RNA occipital lobe (Tissue)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 125.00 0.16 0.26 100.0 SNORD101-201 snoRNA occipital lobe (Tissue)
ENST00000384027.1 ENST00000384027.1_2_73_+ 2–73 4438.00 5.60 9.39 90.28 SNORD101-201 snoRNA occipital lobe (Tissue)
ENST00000384027.1 ENST00000384027.1_3_70_+ 3–70 72671.00 91.74 153.83 99.41 SNORD101-201 snoRNA occipital lobe (Tissue)
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 153.00 0.19 0.32 100.0 SNORD101-201 snoRNA occipital lobe (Tissue)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 19999.00 96.86 42.34 100.0 SNORD37-201 snoRNA occipital lobe (Tissue)
ENST00000384304.1 ENST00000384304.1_2_72_+ 2–72 158787.00 86.79 336.13 98.21 SNORD59A-201 snoRNA occipital lobe (Tissue)
ENST00000384360.1 ENST00000384360.1_1_47_+ 1–47 3437.00 83.81 7.28 100.0 SNORA7B-201 snoRNA occipital lobe (Tissue)
ENST00000384390.1 ENST00000384390.1_1_87_+ 1–87 487.00 86.50 1.03 100.0 SNORD14D-201 snoRNA occipital lobe (Tissue)
ENST00000384673.1 ENST00000384673.1_82_107_+ 82–107 2984.00 64.76 6.32 100.0 Y_RNA.555-201 misc RNA occipital lobe (Tissue)
ENST00000384816.1 ENST00000384816.1_52_73_+ 52–73 37689.00 74.77 79.78 77.18 MIR25-201 miRNA occipital lobe (Tissue)
ENST00000384819.1 ENST00000384819.1_7_28_+ 7–28 152590.00 94.01 323.01 97.07 MIR99B-201 miRNA occipital lobe (Tissue)
ENST00000384832.1 ENST00000384832.1_58_78_+ 58–78 1688.00 39.57 3.57 74.53 MIR23B-201 miRNA occipital lobe (Tissue)
ENST00000384832.1 ENST00000384832.1_58_81_+ 58–81 2330.00 54.62 4.93 76.92 MIR23B-201 miRNA occipital lobe (Tissue)
ENST00000384836.1 ENST00000384836.1_66_87_+ 66–87 33.00 54.10 0.07 100.0 MIR203A-201 miRNA occipital lobe (Tissue)
ENST00000384849.1 ENST00000384849.1_65_85_+ 65–85 2480.00 55.94 5.25 92.61 MIR199B-201 miRNA occipital lobe (Tissue)
ENST00000384849.1 ENST00000384849.1_26_48_+ 26–48 1666.00 37.58 3.53 100.0 MIR199B-201 miRNA occipital lobe (Tissue)
ENST00000384850.1 ENST00000384850.1_17_38_+ 17–38 3213.00 92.33 6.80 100.0 MIR30B-201 miRNA occipital lobe (Tissue)
ENST00000384853.1 ENST00000384853.1_36_58_+ 36–58 11858.00 92.60 25.10 100.0 MIR181D-201 miRNA occipital lobe (Tissue)
ENST00000384857.1 ENST00000384857.1_61_83_+ 61–83 61.00 64.89 0.13 100.0 MIR508-201 miRNA occipital lobe (Tissue)
ENST00000384858.1 ENST00000384858.1_27_48_+ 27–48 93.00 94.90 0.20 100.0 MIR215-201 miRNA occipital lobe (Tissue)
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 3332.00 0.21 7.05 100.0 MIR181A2-201 miRNA occipital lobe (Tissue)
ENST00000384873.3 ENST00000384873.3_16_38_+ 16–38 132873.00 98.37 281.27 99.49 MIR191-201 miRNA occipital lobe (Tissue)
ENST00000384879.1 ENST00000384879.1_15_37_+ 15–37 7330.00 70.81 15.52 75.15 MIR149-201 miRNA occipital lobe (Tissue)
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 6673.00 9.34 14.13 100.0 MIR181C-201 miRNA occipital lobe (Tissue)