ENCFF001RME

Library Details

Organism: Homo Sapiens
Biosample: occipital lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFX
Description: Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 122.00 19.65 0.26 100.0 SNORD113-3-201 snoRNA occipital lobe (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 11283.00 80.33 23.88 100.0 SNORD52-201 snoRNA occipital lobe (Tissue)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 3864.00 42.28 8.18 62.4 SNORD117-201 snoRNA occipital lobe (Tissue)
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 2328.00 25.48 4.93 46.94 SNORD117-201 snoRNA occipital lobe (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 313.00 2.86 0.66 100.0 SNORD114-3-201 snoRNA occipital lobe (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 223.00 2.04 0.47 100.0 SNORD114-3-201 snoRNA occipital lobe (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 9521.00 87.13 20.15 94.21 SNORD114-3-201 snoRNA occipital lobe (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 10.00 1.99 0.02 100.0 RNA5SP298-201 rRNA pseudogene occipital lobe (Tissue)
ENST00000365037.1 ENST00000365037.1_2_82_+ 2–82 28383.00 61.42 60.08 100.0 SNORD115-38-201 snoRNA occipital lobe (Tissue)
ENST00000365073.1 ENST00000365073.1_2_81_+ 2–81 29594.00 51.05 62.65 100.0 SNORD115-10-201 snoRNA occipital lobe (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 3839.00 85.69 8.13 100.0 SNORD113-9-201 snoRNA occipital lobe (Tissue)
ENST00000365099.1 ENST00000365099.1_2_82_+ 2–82 3817.00 40.31 8.08 100.0 SNORD115-20-201 snoRNA occipital lobe (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 17092.00 92.33 36.18 100.0 SNORD38A-201 snoRNA occipital lobe (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 260.00 1.40 0.55 100.0 SNORD38A-201 snoRNA occipital lobe (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 434.00 2.34 0.92 100.0 SNORD38A-201 snoRNA occipital lobe (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 11338.00 90.58 24.00 96.39 SNORD114-20-201 snoRNA occipital lobe (Tissue)
ENST00000365328.1 ENST00000365328.1_238_331_+ 238–331 2707.00 14.66 5.73 100.0 7SK.1-201 misc RNA occipital lobe (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 1180.00 6.39 2.50 62.63 7SK.1-201 misc RNA occipital lobe (Tissue)
ENST00000365328.1 ENST00000365328.1_260_331_+ 260–331 288.00 1.56 0.61 100.0 7SK.1-201 misc RNA occipital lobe (Tissue)
ENST00000365328.1 ENST00000365328.1_1_76_+ 1–76 260.00 1.41 0.55 100.0 7SK.1-201 misc RNA occipital lobe (Tissue)
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 690.00 3.74 1.46 100.0 7SK.1-201 misc RNA occipital lobe (Tissue)
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 473.00 2.56 1.00 78.05 7SK.1-201 misc RNA occipital lobe (Tissue)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 179.00 0.97 0.38 100.0 7SK.1-201 misc RNA occipital lobe (Tissue)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 2559.00 13.86 5.42 75.53 7SK.1-201 misc RNA occipital lobe (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 3208.00 17.38 6.79 82.0 7SK.1-201 misc RNA occipital lobe (Tissue)