ENCFF001RME

Library Details

Organism: Homo Sapiens
Biosample: occipital lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFX
Description: Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 298.00 12.71 0.63 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 116.00 4.95 0.25 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 2.00 0.09 0.00 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 112.00 0.06 0.24 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 283.00 46.32 0.60 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 88.00 14.67 0.19 33.98 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_13_+ 1–13 7.00 1.17 0.01 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 171.00 28.50 0.36 66.02 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 2129.00 43.11 4.51 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 4.00 0.08 0.01 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 86.00 35.10 0.18 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 3186.00 93.54 6.74 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 344.00 61.21 0.73 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 38.00 0.11 0.08 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 20.00 0.06 0.04 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 12.00 0.04 0.03 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 41.00 0.12 0.09 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 257.00 0.77 0.54 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 11.00 0.03 0.02 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 6491.00 3.31 13.74 96.98 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 108.00 0.06 0.23 62.07 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 56.00 0.03 0.12 64.37 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 613.00 18.88 1.30 49.84 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 211.00 91.34 0.45 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 235.00 25.54 0.50 97.51 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA occipital lobe (Tissue)