ENCFF001RME

Library Details

Organism: Homo Sapiens
Biosample: occipital lobe (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFX
Description: Part of ENCODE experiment ENCSR000AFX. The libraries contained in this experiment come from human fetal occipital lobe tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 51.00 18.75 0.11 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 298.00 13.55 0.63 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 545.00 56.95 1.15 90.83 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 151.00 0.03 0.32 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 1862.00 48.91 3.94 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 574.00 17.68 1.22 95.19 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 2.00 0.06 0.00 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 151.00 4.65 0.32 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 637.00 36.82 1.35 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 1259.00 2.31 2.67 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 1060.00 1.95 2.24 85.76 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 15.00 0.03 0.03 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 323.00 0.59 0.68 85.22 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 7778.00 14.29 16.46 53.82 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 213.00 0.39 0.45 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 9.00 0.02 0.02 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 71.00 34.47 0.15 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 54.00 0.03 0.11 96.43 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 2927.00 83.11 6.20 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 75.00 2.13 0.16 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 381.00 30.50 0.81 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 10.00 0.27 0.02 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 8.00 0.01 0.02 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 87.00 0.05 0.18 24.44 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA occipital lobe (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 283.00 19.80 0.60 72.94 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA occipital lobe (Tissue)